Factsheet for GSMUA_Achr11P26740_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0531100-01	Rice	cytosol	53.39	62.91
VIT_01s0010g03540.t01	Wine grape	cytosol	60.17	61.02
EES15312	Sorghum	cytosol	61.04	59.39
TraesCS7D01G261100.1	Wheat	nucleus	60.52	58.98
TraesCS7A01G260100.2	Wheat	nucleus	60.52	58.98
KRG97427	Soybean	cytosol	56.17	58.62
TraesCS7B01G158100.1	Wheat	cytosol, mitochondrion, nucleus	60.0	58.47
Zm00001d031619_P001	Maize	nucleus	59.83	58.21
PGSC0003DMT400074853	Potato	cytosol	57.74	55.8
Solyc05g015320.2.1	Tomato	extracellular	57.74	55.8
AT1G27920.1	Thale cress	nucleus	53.39	54.63
KRH31473	Soybean	cytosol	56.35	54.55
CDY27637	Canola	cytosol	52.52	52.98
CDX84899	Canola	extracellular, nucleus, plastid	52.52	52.61
HORVU7Hr1G054130.4	Barley	mitochondrion	60.0	51.88
Zm00001d049816_P001	Maize	nucleus	23.48	49.45
Bra032853.1-P	Field mustard	cytosol	51.13	48.68
GSMUA_Achr7P06200_001	Banana	cytosol	46.61	45.58
GSMUA_Achr4P19380_001	Banana	cytosol	46.09	45.22
GSMUA_Achr4P03890_001	Banana	cytosol	44.35	43.52
GSMUA_Achr3P13450_001	Banana	cytosol	44.35	43.29
GSMUA_Achr9P17360_001	Banana	cytosol	42.96	42.51
GSMUA_Achr6P23030_001	Banana	cytosol	37.57	38.43
GSMUA_Achr10P...	Banana	nucleus	39.65	37.75
GSMUA_Achr5P10040_001	Banana	nucleus	41.22	37.38
GSMUA_Achr5P11340_001	Banana	cytosol	41.39	35.68
GSMUA_Achr6P05980_001	Banana	cytosol	36.7	35.46
GSMUA_Achr6P04350_001	Banana	cytosol	38.78	35.4
GSMUA_Achr1P02510_001	Banana	cytosol	41.39	35.26
GSMUA_Achr2P21660_001	Banana	endoplasmic reticulum, extracellular	40.52	24.58

Protein Annotations

Gene3D:1.20.58.1520	MapMan:35.1	ncoils:Coil	GO:GO:0000226	GO:GO:0000910	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005819	GO:GO:0005856	GO:GO:0005874	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150
GO:GO:0009524	GO:GO:0009987	GO:GO:0016043	EnsemblPlantsGene:GSMUA_Achr11G26740_001	EnsemblPlants:GSMUA_Achr11P26740_001	EnsemblPlants:GSMUA_Achr11T26740_001
UniProt:M0RVQ4	InterPro:MAP65_Ase1_PRC1	PFAM:PF03999	PANTHER:PTHR19321	PANTHER:PTHR19321:SF3	UniParc:UPI000296B49D
SEG:seg	:	:	:	:	:

Description

65-kDa microtubule-associated protein 8 [Source:GMGC_GENE;Acc:GSMUA_Achr11G26740_001]

Coordinates

chr11:+:25485343..25492576

Molecular Weight (calculated)

66763.0 Da

IEP (calculated)

6.803

GRAVY (calculated)

-0.719

Length

575 amino acids

Sequence
(BLAST)

001: MGSFGMFPGF PSSAIPESSC GYLLQELKLI WDEVGQDQLE RERILLELEQ ECIDMYRRKV DSANILRVRL HQALADSEAE FTNLLLSLGE RSFSGRPEKL
101: TGTLKQQLDA ITPALHEMQL RKEERMNQFR EVQTQIQRIA SEVAGHQPDC NVLVNEGDLS LKKLDEHQNE LQRLHKEKND RLRKVEDYIK VVQNLAETMG
201: MDASMIISDI HPSLLGGSTA QQSRNISDTI LERLNSKVEQ LKDEKRKRTE KLYKLGKALT NLWNLMDTSI EDRQKFYYMN IYTSSAPTDH ILRPGSLSID
301: IIHQVESEVE RLDQLKASKM KELFLKKLSE LREICKKSHL EVPSGSEMDK IMNLIMSGEM DHADLLVIME EHISQAKEEA RSRKDIMEKV EKWMASCEEE
401: QWLEEYSKDE NRYSVSRGAH KNLKRAERAR IIVNKIPDLV ELLMAKTEIW EEERMKNFLY DKVPLMAMLK EYTLLKQEKE EEKQRQRERK KVQTQITAEH
501: ENSFGSRPNT STTRPSNKIL NSSFVSGPSS RRLSIISQHQ RSKNNYANKG ANLNKGSINM TLYNHYYDIF DLTSC

Best Arabidopsis Sequence Match ( AT1G27920.1 )
(BLAST)

001: MGSLQTPIEM RSSSLLDTSC GYLLRELQMI WDEVGEDKFE REKVLLDIEQ ECVEAYRRKV DHANVSRSRL HQELAESEAE LTHFLLCLGE RSVPGRPEKK
101: GGTLREQLDS IAPALREMRL RKDERVKQFR SVKGEIQKIS AEIAGRSTYE DSTRKITIDD NDLSNKKLEE YQNELHRLHD EKNERLQKVD IYICAIRDLS
201: ATLGTEASMI ITKIHPSLND LYGISKNISD DILKKLNGTV VSLEEEKHKR LEKLHHLGRA LSNLWNLMDA SYEDRQKFFH VIDLLSSAPS DVCAPGSITL
301: DIIQQAEAEV KRLDQLKASR IKELFIKKQK ELEDTCNMSH METPSTEMGN ITNLVDSGEV DHVDLLAAMD EKIARAKEEA ASRKGIIEKV DRWMLASDEE
401: RWLEEYDQDE NRYSVSRNAH RNLRRAERAR ITVSKISGLV ESILVKAKSW EVERQKVFLY NEVPLVAMLQ EYNKLRQEKE MEKQRLREMK KMSIPQPVAE
501: GDNFYMARPA SSNRRISNRS MNGGFGSGSP INRKYSGGFN NTNNNYTALG TSIRRESRKS EA

Arabidopsis Description

MAP65-865-kDa microtubule-associated protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7G0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.