Factsheet for GSMUA_Achr9P17360_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0084g00080.t01	Wine grape	cytosol, nucleus, plastid	63.68	65.84
TraesCS1D01G256000.1	Wheat	cytosol	55.77	60.22
TraesCS1B01G267200.2	Wheat	cytosol	59.04	59.55
PGSC0003DMT400008510	Potato	plastid	51.12	59.28
TraesCS1A01G256800.1	Wheat	nucleus	58.69	59.2
KXG21994	Sorghum	cytosol	58.18	59.09
KRH20613	Soybean	cytosol	57.66	59.08
Solyc01g096680.2.1	Tomato	nucleus	57.31	58.52
Os05t0409400-01	Rice	cytosol, nucleus, plastid	59.21	56.95
AT2G38720.1	Thale cress	nucleus	51.46	54.36
Bra017106.1-P	Field mustard	nucleus	51.12	54.1
Zm00001d038174_P002	Maize	cytosol	56.63	53.67
HORVU1Hr1G063330.5	Barley	golgi	58.52	53.63
GSMUA_Achr7P06200_001	Banana	cytosol	52.67	52.04
GSMUA_Achr4P19380_001	Banana	cytosol	51.81	51.37
CDY18372	Canola	nucleus	51.64	50.85
GSMUA_Achr3P13450_001	Banana	cytosol	51.46	50.76
CDX93308	Canola	nucleus	50.77	50.08
GSMUA_Achr4P03890_001	Banana	cytosol	50.43	50.0
GSMUA_Achr6P23030_001	Banana	cytosol	43.72	45.2
Zm00001d007926_P001	Maize	cytosol	12.05	43.75
Zm00001d004213_P001	Maize	cytosol	11.19	43.05
GSMUA_Achr11P...	Banana	nucleus	42.51	42.96
GSMUA_Achr10P...	Banana	nucleus	44.23	42.55
Zm00001d003920_P001	Maize	cytosol	9.98	42.03
GSMUA_Achr6P04350_001	Banana	cytosol	42.86	39.52
GSMUA_Achr6P05980_001	Banana	cytosol	39.76	38.82
GSMUA_Achr5P11340_001	Banana	cytosol	43.37	37.78
GSMUA_Achr5P10040_001	Banana	nucleus	40.28	36.91
GSMUA_Achr1P02510_001	Banana	cytosol	42.86	36.89
GSMUA_Achr2P21660_001	Banana	endoplasmic reticulum, extracellular	44.23	27.11

Protein Annotations

EnsemblPlants:GSMUA_Achr9P17360_001	EnsemblPlants:GSMUA_Achr9T17360_001	EnsemblPlantsGene:GSMUA_Achr9G17360_001	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0000910
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF4
PFAM:PF03999	SEG:seg	UniParc:UPI000295BEFE	UniProt:M0U143	MapMan:35.1	:

Description

65-kDa microtubule-associated protein 5 [Source:GMGC_GENE;Acc:GSMUA_Achr9G17360_001]

Coordinates

chr9:-:11897194..11903486

Molecular Weight (calculated)

66187.5 Da

IEP (calculated)

7.314

GRAVY (calculated)

-0.633

Length

581 amino acids

Sequence
(BLAST)

001: MSRLPLPSPA RTEATTCGSL LQELQDLWDE IGENDRERDR TILQLEQECL DLYRRKVDQT RKHKAELHQM LADGEAEVSN LISILGERET FVRLEKKTGT
101: LKEQLAMIKP LLDDLGQKKE QRIKEFLDVQ LQIVRICAEI AGSIHQGSST SAQVDERDLT LKRLGELKCQ LHELQKDKNL RLQKVDAYIK LIQDLSLVLS
201: VDFYKMISGV HPSFGDSSNN LTESISNDTL ARLAGIVHSL EQEKLQRLQK LQNLGSTLVE LWNLMDMPMD EQKRFDHVTC LISSSVDSVL GKGCLALELI
301: DQAEHEVERL NVLKASKMKE LVLKKQNELD KIYRSVHMDV DGEGARETLI GLIDSGKVDL AELLSRMDNQ TVKAKEQALS RKDILEKVEK WTFASEEENW
401: LDDYEKDENR YAAGRGVHKN LKRAEKARIL VNKIPSLVEN LASKIKTWEN EKGMPFMYDK VRMLDSLENY VKLRQQREEE KRRFRERKKL QEQFATEQEA
501: LFGSKPSPMR QFPTKKPLGQ SSSANIACGT PTGRRVSTPF GRQGIMSSGK EKKGGKGSVV TPDNYVSLQK DDSVSHNSSI L

Best Arabidopsis Sequence Match ( AT2G38720.1 )
(BLAST)

001: MSPSSTTTCT SLLEELQMIW DEIGESYNER DKMLLELEQE CLDIYNKKVE KTRKFRAELQ RSLAQAEAEI ASLMSALGEK VSFAKKEGSL KEQISSVKPV
101: LEDLLMKKDR RRKELSETLN QIAEITSNIA GNDYTVSSGS EVDESDLTQR KLDELRADLQ DLRNEKAVRL QKVNSYISAV HELSEILSFD FSKALNSVHS
201: SLTEFSKTHS KSISNDTLAR FTELVKSLKA EKHERLLKLQ GLGRSMQELW NLMETPMDER RRFDHCSSLL SSLPDDALKK GCLSLDIIRE AEDEVRRLNS
301: LKSSKMKELV FKRQCELEEI CRGNHMDINS DAARKSLVEL IESGDGDLSD ILASIDGQIE KAREEALSRK EILDKVDKWR HAKEEETWLD DYEKDENRFS
401: AVRGAHKNLK RAEKARSLIS KIPAMVDVLT TKVKAWEKER GVPFLCDKQP LLQTLEDDIV IRAQREEEKR QFREQKRLQG QLATEKEAKY GSKSAKKKPL
501: GQSLNTDNVT KTPIGRRIGN TPGRSVTSGG KDYRGNAVIP LNYVALQKDD

Arabidopsis Description

MAP65-565-kDa microtubule-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.