Factsheet for PGSC0003DMT400008510

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g096680.2.1	Tomato	nucleus	97.21	85.59
VIT_13s0084g00080.t01	Wine grape	cytosol, nucleus, plastid	62.87	56.05
KRH20613	Soybean	cytosol	60.28	53.26
GSMUA_Achr9P17360_001	Banana	cytosol	59.28	51.12
Bra017106.1-P	Field mustard	nucleus	52.89	48.27
AT2G38720.1	Thale cress	nucleus	52.89	48.18
TraesCS1D01G256000.1	Wheat	cytosol	50.5	47.03
TraesCS1B01G267200.2	Wheat	cytosol	52.1	45.31
TraesCS1A01G256800.1	Wheat	nucleus	52.1	45.31
CDY18372	Canola	nucleus	53.29	45.25
CDX93308	Canola	nucleus	52.89	44.99
KXG21994	Sorghum	cytosol	51.3	44.93
Os05t0409400-01	Rice	cytosol, nucleus, plastid	53.69	44.54
Zm00001d038174_P002	Maize	cytosol	52.3	42.74
HORVU1Hr1G063330.5	Barley	golgi	52.3	41.32
PGSC0003DMT400057428	Potato	cytosol	47.31	40.79
Zm00001d007926_P001	Maize	cytosol	12.97	40.62
PGSC0003DMT400033471	Potato	cytosol	45.71	39.9
Zm00001d004213_P001	Maize	cytosol	11.98	39.74
Zm00001d003920_P001	Maize	cytosol	10.78	39.13
PGSC0003DMT400074853	Potato	cytosol	42.71	35.97
PGSC0003DMT400075869	Potato	nucleus	38.72	32.39
PGSC0003DMT400058659	Potato	cytosol, plastid	38.32	31.95
PGSC0003DMT400079660	Potato	cytosol	41.52	27.92
PGSC0003DMT400070431	Potato	nucleus	37.72	27.23
PGSC0003DMT400033224	Potato	nucleus	37.13	24.64

Protein Annotations

EnsemblPlants:PGSC0003DMT400008510	EnsemblPlantsGene:PGSC0003DMG400003293	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0000910	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF4	PFAM:PF03999
PGSC:PGSC0003DMG400003293	SEG:seg	UniParc:UPI0002957F14	UniProt:M0ZUP0	MapMan:35.1	:

Description

Protein regulator of cytokinesis [Source:PGSC_GENE;Acc:PGSC0003DMG400003293]

Coordinates

chr1:-:74420064..74430041

Molecular Weight (calculated)

56480.7 Da

IEP (calculated)

8.933

GRAVY (calculated)

-0.553

Length

501 amino acids

Sequence
(BLAST)

001: MSITVSVSSP LSLSKSATTT CSSLLQELQS GKMKGTLKQK LAVIDPVLKD IRTKKHERIK EFLNIETQIA AICAEIAGND TVISPTDIQV SEQDLTAKRL
101: GELKSHLQEL QSEKNLRLQR VNSYMSAIHD LTVVMSLDFK NIIANINPSL ANHLNVQSKS ISNETLASLT SEVNSLKQLK QQRLERLQDL GSSLIELWNL
201: MDMPMEEQLR FNHVTSLVSS SIDEITRQGS LAIHIVEQAE VEVERLNALK TSKLRELIFK RQNELEEIYR NVHMDVDSET ARQILIQLME SGSDLSNLLS
301: SMDDQVVKAK EQASSRKEVL DKVEKWKHAS QEESWLDEYE KDDNRYSAGK GVHINLKRAE KARILVSKIP SLVENLTAKI KAWEKERGMP FLYHKAPLLH
401: TLEEYIISRQ EKQEEKRRSR EQKRLQDQFA VEQETIYGSK SAKKPLGNAN TVPGTPNSRR MSTPSGRYGA SIGKEKRGSG HVGAAIPVNY VSLAKDDQKC
501: G

Best Arabidopsis Sequence Match ( AT2G38720.1 )
(BLAST)

001: MSPSSTTTCT SLLEELQMIW DEIGESYNER DKMLLELEQE CLDIYNKKVE KTRKFRAELQ RSLAQAEAEI ASLMSALGEK VSFAKKEGSL KEQISSVKPV
101: LEDLLMKKDR RRKELSETLN QIAEITSNIA GNDYTVSSGS EVDESDLTQR KLDELRADLQ DLRNEKAVRL QKVNSYISAV HELSEILSFD FSKALNSVHS
201: SLTEFSKTHS KSISNDTLAR FTELVKSLKA EKHERLLKLQ GLGRSMQELW NLMETPMDER RRFDHCSSLL SSLPDDALKK GCLSLDIIRE AEDEVRRLNS
301: LKSSKMKELV FKRQCELEEI CRGNHMDINS DAARKSLVEL IESGDGDLSD ILASIDGQIE KAREEALSRK EILDKVDKWR HAKEEETWLD DYEKDENRFS
401: AVRGAHKNLK RAEKARSLIS KIPAMVDVLT TKVKAWEKER GVPFLCDKQP LLQTLEDDIV IRAQREEEKR QFREQKRLQG QLATEKEAKY GSKSAKKKPL
501: GQSLNTDNVT KTPIGRRIGN TPGRSVTSGG KDYRGNAVIP LNYVALQKDD

Arabidopsis Description

MAP65-565-kDa microtubule-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.