Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G267200.2 | Wheat | cytosol | 97.96 | 91.49 |
| TraesCS1A01G256800.1 | Wheat | nucleus | 97.77 | 91.32 |
| HORVU1Hr1G063330.5 | Barley | golgi | 94.8 | 80.44 |
| Os05t0409400-01 | Rice | cytosol, nucleus, plastid | 79.18 | 70.53 |
| KXG21994 | Sorghum | cytosol | 73.98 | 69.58 |
| Zm00001d003920_P001 | Maize | cytosol | 17.1 | 66.67 |
| Zm00001d004213_P001 | Maize | cytosol | 18.59 | 66.23 |
| Zm00001d007926_P001 | Maize | cytosol | 19.52 | 65.62 |
| Zm00001d038174_P002 | Maize | cytosol | 74.72 | 65.58 |
| GSMUA_Achr9P17360_001 | Banana | cytosol | 60.22 | 55.77 |
| VIT_13s0084g00080.t01 | Wine grape | cytosol, nucleus, plastid | 56.69 | 54.27 |
| PGSC0003DMT400008510 | Potato | plastid | 47.03 | 50.5 |
| Solyc01g096680.2.1 | Tomato | nucleus | 50.93 | 48.15 |
| KRH20613 | Soybean | cytosol | 50.56 | 47.97 |
| AT2G38720.1 | Thale cress | nucleus | 46.84 | 45.82 |
| Bra017106.1-P | Field mustard | nucleus | 45.91 | 44.99 |
| CDX93308 | Canola | nucleus | 45.91 | 41.94 |
| CDY18372 | Canola | nucleus | 45.72 | 41.69 |
| TraesCS7D01G399400.1 | Wheat | cytosol | 43.87 | 40.69 |
| TraesCS7D01G224800.1 | Wheat | cytosol | 43.68 | 40.38 |
| TraesCS6D01G263300.1 | Wheat | cytosol | 40.89 | 37.48 |
| TraesCS4D01G231800.3 | Wheat | nucleus | 40.15 | 35.35 |
| TraesCS5D01G240800.1 | Wheat | nucleus | 38.1 | 34.8 |
| TraesCS1D01G386100.1 | Wheat | cytosol | 41.08 | 32.45 |
| TraesCS3D01G264700.2 | Wheat | cytosol | 40.71 | 31.74 |
| TraesCS7D01G261100.1 | Wheat | nucleus | 34.39 | 31.36 |
| TraesCS4D01G051300.1 | Wheat | cytosol | 34.2 | 31.13 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G256000.1 | EnsemblPlantsGene:TraesCS1D01G256000 | Gene3D:1.20.58.1520 | GO:GO:0000226 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:MAP65_Ase1_PRC1 |
| ncoils:Coil | PANTHER:PTHR19321 | PANTHER:PTHR19321:SF4 | PFAM:PF03999 | SEG:seg | MapMan:35.1 |
Description
No Description!
Coordinates
chr1D:+:348662015..348667125
Molecular Weight (calculated)
61308.0 Da
IEP (calculated)
7.835
GRAVY (calculated)
-0.607
Length
538 amino acids
Sequence
(BLAST)
(BLAST)
001: MILQLEEDCL NVYRKKVEQT RKQKADLLQV MSLGEAEIEK ILSALGERES FSRVEKLGGT LMEQLTKLEP VLDDLRRRRD ERINEFLAVQ LHIVRLQAEI
101: SGTINHGDPA APLVDETDLS TGRLAELKTQ LNELQTEKNL RLQKIDAQIK CINEMCNMMS LDLKKTLYEV HPSFVELERI KSMSISDSTL DRLAGTVHAL
201: NQEKKQRLRK LQDLGSTLIE LWSLMDTPLD EQKCFDHVTS LISVSPNRVM PQGCLAHDLI EKVEVEVKRL KHLKASKMKE LVLKKMTQLE EIYRSVHMHI
301: DSDHEWQILT ELIDSGRADL SELLTDMDDR IAEARDLALS RKDILEKVEK WTSAIEEEGW LGEYEGDQNR YNAGRGAHIN LKRAEKARVL VSKIPSLLEN
401: LTTKVKAWEK EKGMSFMYDK KRLLDSLEKY TSERQQKEEE KRRSRELKKL QEQFAAEQGA PYGAKPSPMR PLSARKPLGQ STNVNIVGGT PNSRRVSTPV
501: SRKGGLSCGK MKDTGKTAAS IPANYVSLPK DCSDSSYM
101: SGTINHGDPA APLVDETDLS TGRLAELKTQ LNELQTEKNL RLQKIDAQIK CINEMCNMMS LDLKKTLYEV HPSFVELERI KSMSISDSTL DRLAGTVHAL
201: NQEKKQRLRK LQDLGSTLIE LWSLMDTPLD EQKCFDHVTS LISVSPNRVM PQGCLAHDLI EKVEVEVKRL KHLKASKMKE LVLKKMTQLE EIYRSVHMHI
301: DSDHEWQILT ELIDSGRADL SELLTDMDDR IAEARDLALS RKDILEKVEK WTSAIEEEGW LGEYEGDQNR YNAGRGAHIN LKRAEKARVL VSKIPSLLEN
401: LTTKVKAWEK EKGMSFMYDK KRLLDSLEKY TSERQQKEEE KRRSRELKKL QEQFAAEQGA PYGAKPSPMR PLSARKPLGQ STNVNIVGGT PNSRRVSTPV
501: SRKGGLSCGK MKDTGKTAAS IPANYVSLPK DCSDSSYM
001: MSPSSTTTCT SLLEELQMIW DEIGESYNER DKMLLELEQE CLDIYNKKVE KTRKFRAELQ RSLAQAEAEI ASLMSALGEK VSFAKKEGSL KEQISSVKPV
101: LEDLLMKKDR RRKELSETLN QIAEITSNIA GNDYTVSSGS EVDESDLTQR KLDELRADLQ DLRNEKAVRL QKVNSYISAV HELSEILSFD FSKALNSVHS
201: SLTEFSKTHS KSISNDTLAR FTELVKSLKA EKHERLLKLQ GLGRSMQELW NLMETPMDER RRFDHCSSLL SSLPDDALKK GCLSLDIIRE AEDEVRRLNS
301: LKSSKMKELV FKRQCELEEI CRGNHMDINS DAARKSLVEL IESGDGDLSD ILASIDGQIE KAREEALSRK EILDKVDKWR HAKEEETWLD DYEKDENRFS
401: AVRGAHKNLK RAEKARSLIS KIPAMVDVLT TKVKAWEKER GVPFLCDKQP LLQTLEDDIV IRAQREEEKR QFREQKRLQG QLATEKEAKY GSKSAKKKPL
501: GQSLNTDNVT KTPIGRRIGN TPGRSVTSGG KDYRGNAVIP LNYVALQKDD
101: LEDLLMKKDR RRKELSETLN QIAEITSNIA GNDYTVSSGS EVDESDLTQR KLDELRADLQ DLRNEKAVRL QKVNSYISAV HELSEILSFD FSKALNSVHS
201: SLTEFSKTHS KSISNDTLAR FTELVKSLKA EKHERLLKLQ GLGRSMQELW NLMETPMDER RRFDHCSSLL SSLPDDALKK GCLSLDIIRE AEDEVRRLNS
301: LKSSKMKELV FKRQCELEEI CRGNHMDINS DAARKSLVEL IESGDGDLSD ILASIDGQIE KAREEALSRK EILDKVDKWR HAKEEETWLD DYEKDENRFS
401: AVRGAHKNLK RAEKARSLIS KIPAMVDVLT TKVKAWEKER GVPFLCDKQP LLQTLEDDIV IRAQREEEKR QFREQKRLQG QLATEKEAKY GSKSAKKKPL
501: GQSLNTDNVT KTPIGRRIGN TPGRSVTSGG KDYRGNAVIP LNYVALQKDD
Arabidopsis Description
MAP65-565-kDa microtubule-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.