Factsheet for Zm00001d038174_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003920_P001	Maize	cytosol	20.88	92.75
Zm00001d004213_P001	Maize	cytosol	22.35	90.73
Zm00001d007926_P001	Maize	cytosol	23.33	89.38
KXG21994	Sorghum	cytosol	81.89	87.76
TraesCS1B01G267200.2	Wheat	cytosol	70.64	75.17
TraesCS1D01G256000.1	Wheat	cytosol	65.58	74.72
TraesCS1A01G256800.1	Wheat	nucleus	69.98	74.48
Os05t0409400-01	Rice	cytosol, nucleus, plastid	70.8	71.85
HORVU1Hr1G063330.5	Barley	golgi	70.8	68.45
GSMUA_Achr9P17360_001	Banana	cytosol	53.67	56.63
VIT_13s0084g00080.t01	Wine grape	cytosol, nucleus, plastid	51.22	55.87
PGSC0003DMT400008510	Potato	plastid	42.74	52.3
KRH20613	Soybean	cytosol	47.63	51.5
Solyc01g096680.2.1	Tomato	nucleus	46.98	50.62
Bra017106.1-P	Field mustard	nucleus	43.39	48.45
AT2G38720.1	Thale cress	nucleus	43.39	48.36
CDX93308	Canola	nucleus	43.39	45.16
CDY18372	Canola	nucleus	43.07	44.75
Zm00001d037413_P002	Maize	cytosol	39.8	38.67
Zm00001d030420_P001	Maize	cytosol	14.03	37.55
Zm00001d028363_P001	Maize	cytosol	35.89	36.01
Zm00001d045864_P004	Maize	mitochondrion	38.17	34.56
Zm00001d031619_P001	Maize	nucleus	32.95	34.18
Zm00001d020685_P002	Maize	cytosol	35.73	34.06
Zm00001d006888_P001	Maize	cytosol	14.36	32.96
Zm00001d015096_P002	Maize	nucleus	32.14	32.24
Zm00001d053956_P001	Maize	nucleus	31.32	32.21
Zm00001d011615_P001	Maize	cytosol, nucleus, plastid	37.03	32.2
Zm00001d043831_P001	Maize	cytosol, mitochondrion	35.89	29.97
Zm00001d046884_P001	Maize	plastid	20.23	25.83
Zm00001d029060_P002	Maize	cytosol, nucleus, plasma membrane	17.94	23.97
Zm00001d049816_P001	Maize	nucleus	10.6	23.81
Zm00001d030008_P005	Maize	cytosol	18.11	23.72
Zm00001d047347_P031	Maize	cytosol	19.74	22.24
Zm00001d033794_P001	Maize	nucleus	33.77	20.5
Zm00001d030102_P004	Maize	cytosol	19.74	20.4

Protein Annotations

Gene3D:1.20.58.1520	EntrezGene:100284360	MapMan:35.1	UniProt:A0A1D6M476	ProteinID:AQK85938.1	ncoils:Coil
GO:GO:0000226	GO:GO:0000910	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	PFAM:PF03999
PANTHER:PTHR19321	PANTHER:PTHR19321:SF4	UniParc:UPI0008459E72	EnsemblPlantsGene:Zm00001d038174	EnsemblPlants:Zm00001d038174_P002	EnsemblPlants:Zm00001d038174_T002
SEG:seg	:	:	:	:	:

Description

microtubule-associated protein 65-5

Coordinates

chr6:+:150536285..150541728

Molecular Weight (calculated)

69736.0 Da

IEP (calculated)

8.261

GRAVY (calculated)

-0.619

Length

613 amino acids

Sequence
(BLAST)

001: MATPPPPLPP MPPRHVSCGS LLQELQEIPR FLVLLWHQFC SALPTSLNTT ILKQELWGEI GQDEMKRDRM ILQLEEDCLN VYKQKVNQTR KQKADLLQEL
101: SLGEADIDKI LSALGERETF PRSEKLGGTL MEQLAKIEPV LEDLRRRRDE RVNEFKAIQS KIVCLQAEIS GAIDHGDPAA PVVDENDLSL KRSGELKEHL
201: NDLQTEKNGR LQKIDIQTNS IHEMCNIMSI DLKMALKDVH PSYAELGRSK PMSISNSSLD RLSEKVHALN HEKKQRLRKL QDLGSTLIEL WNLMDTPTDE
301: QRFFDHVTSL IKVSPTTAMP QGCLAHEIIE KVETEVKRLT KLKASKMKEL VFKKLTDLEE IYRSVHMDID SDSERQTLND LIDSGRADLS ELLARMDIRI
401: AEAKEHALSR KDILEKVEKW TLASEEETWL DEYERDQNRY NAVRGAHINL KRAEKARILV SKLPSLLENL TAKIKAWEKE MGIPFIFNKA SSITHCSCQT
501: KRAYEYTCTR QQKEEEKRRS RELKKLQEQF ATEQGAKFGT KPSPIRPLSS RKPLGQSSNA NIIGGTPTSR RVSTPMSRKG RPSSGRVQEA VKTAVAPANY
601: VALPKDCSDI STL

Best Arabidopsis Sequence Match ( AT2G38720.1 )
(BLAST)

001: MSPSSTTTCT SLLEELQMIW DEIGESYNER DKMLLELEQE CLDIYNKKVE KTRKFRAELQ RSLAQAEAEI ASLMSALGEK VSFAKKEGSL KEQISSVKPV
101: LEDLLMKKDR RRKELSETLN QIAEITSNIA GNDYTVSSGS EVDESDLTQR KLDELRADLQ DLRNEKAVRL QKVNSYISAV HELSEILSFD FSKALNSVHS
201: SLTEFSKTHS KSISNDTLAR FTELVKSLKA EKHERLLKLQ GLGRSMQELW NLMETPMDER RRFDHCSSLL SSLPDDALKK GCLSLDIIRE AEDEVRRLNS
301: LKSSKMKELV FKRQCELEEI CRGNHMDINS DAARKSLVEL IESGDGDLSD ILASIDGQIE KAREEALSRK EILDKVDKWR HAKEEETWLD DYEKDENRFS
401: AVRGAHKNLK RAEKARSLIS KIPAMVDVLT TKVKAWEKER GVPFLCDKQP LLQTLEDDIV IRAQREEEKR QFREQKRLQG QLATEKEAKY GSKSAKKKPL
501: GQSLNTDNVT KTPIGRRIGN TPGRSVTSGG KDYRGNAVIP LNYVALQKDD

Arabidopsis Description

MAP65-565-kDa microtubule-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.