Factsheet for GSMUA_Achr3P13450_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P19380_001	Banana	cytosol	86.93	87.37
GSMUA_Achr7P06200_001	Banana	cytosol	85.23	85.37
GSMUA_Achr4P03890_001	Banana	cytosol	79.29	79.69
KRH73815	Soybean	cytosol	75.38	76.29
KRH14311	Soybean	endoplasmic reticulum	75.04	74.92
Solyc07g064970.2.1	Tomato	nucleus	73.01	74.01
PGSC0003DMT400057428	Potato	cytosol	73.01	74.01
VIT_19s0090g01230.t01	Wine grape	endoplasmic reticulum	70.12	73.75
PGSC0003DMT400033471	Potato	cytosol	69.95	71.78
KRH46253	Soybean	nucleus	37.69	70.48
Bra028986.1-P	Field mustard	cytosol	70.29	70.41
Solyc12g014490.1.1	Tomato	cytosol	67.74	70.37
KRH14315	Soybean	cytosol, endoplasmic reticulum	70.97	70.13
CDY19902	Canola	cytosol	69.61	70.09
CDY17313	Canola	cytosol	69.44	69.91
Bra002922.1-P	Field mustard	cytosol	69.44	69.91
Bra035564.1-P	Field mustard	cytosol	69.27	69.51
KRG98677	Soybean	cytosol	51.44	69.02
AT5G55230.2	Thale cress	cytosol	72.16	68.99
CDY20777	Canola	cytosol	68.93	68.93
CDX89305	Canola	cytosol	66.55	68.89
Bra026405.1-P	Field mustard	cytosol	66.38	68.72
CDY14300	Canola	nucleus	67.74	68.56
CDY06596	Canola	cytosol	68.42	68.42
Bra010428.1-P	Field mustard	cytosol	67.57	68.38
TraesCS7B01G304900.2	Wheat	cytosol	67.23	68.28
TraesCS7D01G399400.1	Wheat	cytosol	67.23	68.28
AT4G26760.1	Thale cress	cytosol	66.89	68.17
Os06t0611000-01	Rice	nucleus	66.89	67.81
TraesCS7A01G405500.1	Wheat	cytosol	66.72	67.76
HORVU7Hr1G094860.1	Barley	cytosol	66.38	67.41
EER88641	Sorghum	cytosol	66.04	67.07
CDY36737	Canola	nucleus	70.8	66.19
CDY12006	Canola	cytosol	70.12	64.13
CDX94287	Canola	nucleus	65.87	58.61
GSMUA_Achr9P17360_001	Banana	cytosol	50.76	51.46
CDX97365	Canola	nucleus	67.57	49.14
GSMUA_Achr6P23030_001	Banana	cytosol	44.65	46.8
GSMUA_Achr11P...	Banana	nucleus	43.29	44.35
GSMUA_Achr10P...	Banana	nucleus	44.99	43.87
GSMUA_Achr6P04350_001	Banana	cytosol	46.35	43.33
GSMUA_Achr5P11340_001	Banana	cytosol	48.73	43.03
GSMUA_Achr5P10040_001	Banana	nucleus	44.82	41.64
GSMUA_Achr1P02510_001	Banana	cytosol	47.71	41.63
GSMUA_Achr6P05980_001	Banana	cytosol	41.43	41.01
GSMUA_Achr2P21660_001	Banana	endoplasmic reticulum, extracellular	46.18	28.69

Protein Annotations

EnsemblPlants:GSMUA_Achr3P13450_001	EnsemblPlants:GSMUA_Achr3T13450_001	EnsemblPlantsGene:GSMUA_Achr3G13450_001	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0000910
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF15
PFAM:PF03999	SEG:seg	UniParc:UPI000294B5A4	UniProt:M0SEB2	MapMan:13.4.3.6	:

Description

65-kDa microtubule-associated protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G13450_001]

Coordinates

chr3:-:10063126..10070422

Molecular Weight (calculated)

66083.9 Da

IEP (calculated)

4.872

GRAVY (calculated)

-0.505

Length

589 amino acids

Sequence
(BLAST)

001: MAVTDSQNPL LGVTTCGSLL QQLQLIWDEV GESDEERDKM LLQLEQECLD VYKRKVEQAS KTRALLLQSL ADSKAELARL LSALGQKSFV GIPDKSSGTI
101: KEQLAVIGPL LEQLCKQQED RMREFADVQL QIEKISGEIA GTLNIGEQMR TLMVDVEDLS LKKLDEYQSQ LKELQKEKSD RLHKVLDLVS TVHDLCAVLG
201: LDFFSTVTEV HPSLNDSVDV QSKSISNDTI SNLCRMVLSL KEDKKMRLQK LQELAAQLID LWNLMDTQME EQELFSHVTC NLSATVDEVT VPGALALDLI
301: EQAEVEVERL DQLKASKMKE IAFRKQTELE DIYARAHVDI NSAAARDKIL ALVDSGNVES SQLLAEMDNQ ILKAKEEAMS RKEILEKVEK WMSACEEESW
401: LEDYNRDDNR YNSSRGAHLN LKRAEKARIL VNKIPALVET LVAKIQTWEE DHGMSFMYDG VPLLAMLDEY TMLRQEREEE KRRQKDQKRM HEQLATEQES
501: MFSSRPSPAR PLGTKKVVGP RANGGPSNGT PSRRLSLNAH QGSTNGVRSV SRDGKRDGNR PAGPVNYVAI VKEDAGSHVS GTDQVPASP

Best Arabidopsis Sequence Match ( AT5G55230.1 )
(BLAST)

001: MAVTDTESPH LGEITCGTLL EKLQEIWDEV GESDDERDKL LLQIEQECLD VYKRKVEQAA KSRAELLQTL SDANAELSSL TMSLGDKSLV GIPDKSSGTI
101: KEQLAAIAPA LEQLWQQKEE RVREFSDVQS QIQKICGDIA GGLSNEVPIV DESDLSLKKL DDFQSQLQEL QKEKSDRLRK VLEFVSTVHD LCAVLGLDFL
201: STVTEVHPSL DEDTSVQSKS ISNETLSRLA KTVLTLKDDK KQRLQKLQEL ATQLIDLWNL MDTPDEEREL FDHVTCNISS SVDEVTVPGA LARDLIEQAE
301: VEVDRLDQLK ASRMKEIAFK KQSELEEIYA RAHVEVNPES ARERIMSLID SGNVEPTELL ADMDSQISKA KEEAFSRKDI LDRVEKWMSA CEEESWLEDY
401: NRDQNRYSAS RGAHLNLKRA EKARILVSKI PAMVDTLVAK TRAWEEEHSM SFAYDGVPLL AMLDEYGMLR QEREEEKRRL REQKKVQEQP HVEQESAFST
501: RPSPARPVSA KKTVGPRANN GGANGTHNRR LSLNANQNGS RSTAKEAGRR ETLNRPAAPT NYVAISKEEA ASSPVSGAAD HQVPASP

Arabidopsis Description

ATMAP65-1Microtubule-associated proteins 65-1 [Source:UniProtKB/TrEMBL;Acc:F4K3E4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.