CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G399400.1	Wheat	cytosol	83.1	83.1
TraesCS7B01G304900.2	Wheat	cytosol	82.76	82.76
TraesCS7A01G405500.1	Wheat	cytosol	82.24	82.24
HORVU7Hr1G094860.1	Barley	cytosol	82.24	82.24
Os06t0611000-01	Rice	nucleus	79.66	79.52
GSMUA_Achr4P19380_001	Banana	cytosol	68.62	67.92
GSMUA_Achr7P06200_001	Banana	cytosol	67.93	67.01
KRH73815	Soybean	cytosol	66.9	66.67
GSMUA_Achr3P13450_001	Banana	cytosol	67.07	66.04
GSMUA_Achr4P03890_001	Banana	cytosol	66.55	65.87
KRH14311	Soybean	endoplasmic reticulum	66.03	64.92
Solyc07g064970.2.1	Tomato	nucleus	63.79	63.68
PGSC0003DMT400057428	Potato	cytosol	63.62	63.51
VIT_19s0090g01230.t01	Wine grape	endoplasmic reticulum	60.52	62.68
Bra028986.1-P	Field mustard	cytosol	62.59	61.73
Bra002922.1-P	Field mustard	cytosol	62.24	61.71
CDY17313	Canola	cytosol	62.24	61.71
CDY19902	Canola	cytosol	62.24	61.71
PGSC0003DMT400033471	Potato	cytosol	60.86	61.5
KRH14315	Soybean	cytosol, endoplasmic reticulum	63.1	61.41
Bra035564.1-P	Field mustard	cytosol	61.38	60.65
CDY20777	Canola	cytosol	61.55	60.61
CDX89305	Canola	cytosol	59.31	60.46
Solyc12g014490.1.1	Tomato	cytosol	58.97	60.32
Bra026405.1-P	Field mustard	cytosol	58.97	60.11
CDY06596	Canola	cytosol	61.03	60.1
CDY14300	Canola	nucleus	60.17	59.97
KRG98677	Soybean	cytosol	45.34	59.91
Bra010428.1-P	Field mustard	cytosol	60.0	59.79
AT5G55230.2	Thale cress	cytosol	63.45	59.74
EER89674	Sorghum	cytosol	60.52	59.29
AT4G26760.1	Thale cress	cytosol	58.79	59.0
KRH46253	Soybean	nucleus	31.72	58.41
CDY36737	Canola	nucleus	63.28	58.25
CDY12006	Canola	cytosol	62.93	56.68
CDX94287	Canola	nucleus	58.45	51.21
KXG21994	Sorghum	cytosol	42.76	43.36
EER98994	Sorghum	nucleus	44.48	43.29
CDX97365	Canola	nucleus	59.66	42.72
EER92583	Sorghum	cytosol	44.48	42.23
EES15312	Sorghum	cytosol	40.34	39.59
OQU87349	Sorghum	golgi, vacuole	48.28	39.16
EES06214	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.07	36.75
EER90980	Sorghum	cytosol	39.31	36.02
EES11428	Sorghum	nucleus	11.38	22.92
OQU77968	Sorghum	cytosol	13.1	20.71

Protein Annotations

Gene3D:1.20.58.1520	MapMan:13.4.3.6	EntrezGene:8082437	UniProt:C5Z5S5	ncoils:Coil	EnsemblPlants:EER88641
ProteinID:EER88641	ProteinID:EER88641.1	GO:GO:0000226	GO:GO:0000910	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
InterPro:MAP65_Ase1_PRC1	PFAM:PF03999	PANTHER:PTHR19321	PANTHER:PTHR19321:SF15	EnsemblPlantsGene:SORBI_3010G189800	unigene:Sbi.10541
UniParc:UPI0001A8945F	RefSeq:XP_002437274.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:53100683..53105829

Molecular Weight (calculated)

64845.9 Da

IEP (calculated)

5.301

GRAVY (calculated)

-0.497

Length

580 amino acids

Sequence
(BLAST)

001: MGVAGHNDPL LGETTCGSLL QQLQLIWDEV GESDDDRDKM LLQLEQECLD VYRRKVDQAS SFRSRLLQQL DNSKLELTRL LSALGESSIS GIPDKTSGTI
101: KEQLAAMSPS LEILCRKRES RVKEFADVQL QIQILRDEIA GNLHVSEHLE TPHVNEDDLS VRKLNEYLSE LQALQKEKST RLHKILESVS SVHDLCSVLG
201: MDFVGTVTKV HPSLDDSVSV QSKSISDETI SKLSKMVIVL QEEKSKRFAK IQAIASQLSD LWNLMDAPVE ERQPFHHVTC NMSSTLDDVT VPGALALDVI
301: QQAELEVERL DELKASRMKD IAFKKQTELE DIYARAHVAI DSSAARDRIM SIIESSSFEP SELLADMENQ ILKANEESLS RKDILERVDR WMSACEEESW
401: LEDYSRDDNR YSATRGAHLN LKRAEKARVL VNKIPAIVDT LVAKTRAWEQ EHGAAFTYDG VPLLAMLDEY KILRQEKEDE KRRMRDQKKM NDQLAAEQEK
501: LFGSKPSPAR PQSSSRKVAG ARISGVGGAA NGTPVRRLSA LQSGGRTVSR DGRRDASRPV APVNYVAIAK EDAVSQASSN

Best Arabidopsis Sequence Match ( AT5G55230.1 )
(BLAST)

001: MAVTDTESPH LGEITCGTLL EKLQEIWDEV GESDDERDKL LLQIEQECLD VYKRKVEQAA KSRAELLQTL SDANAELSSL TMSLGDKSLV GIPDKSSGTI
101: KEQLAAIAPA LEQLWQQKEE RVREFSDVQS QIQKICGDIA GGLSNEVPIV DESDLSLKKL DDFQSQLQEL QKEKSDRLRK VLEFVSTVHD LCAVLGLDFL
201: STVTEVHPSL DEDTSVQSKS ISNETLSRLA KTVLTLKDDK KQRLQKLQEL ATQLIDLWNL MDTPDEEREL FDHVTCNISS SVDEVTVPGA LARDLIEQAE
301: VEVDRLDQLK ASRMKEIAFK KQSELEEIYA RAHVEVNPES ARERIMSLID SGNVEPTELL ADMDSQISKA KEEAFSRKDI LDRVEKWMSA CEEESWLEDY
401: NRDQNRYSAS RGAHLNLKRA EKARILVSKI PAMVDTLVAK TRAWEEEHSM SFAYDGVPLL AMLDEYGMLR QEREEEKRRL REQKKVQEQP HVEQESAFST
501: RPSPARPVSA KKTVGPRANN GGANGTHNRR LSLNANQNGS RSTAKEAGRR ETLNRPAAPT NYVAISKEEA ASSPVSGAAD HQVPASP

Arabidopsis Description

ATMAP65-1Microtubule-associated proteins 65-1 [Source:UniProtKB/TrEMBL;Acc:F4K3E4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.