Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84899 | Canola | extracellular, nucleus, plastid | 87.37 | 85.54 |
| CDY27637 | Canola | cytosol | 86.12 | 84.91 |
| Bra032853.1-P | Field mustard | cytosol | 83.81 | 77.98 |
| KRG97427 | Soybean | cytosol | 63.7 | 64.97 |
| VIT_01s0010g03540.t01 | Wine grape | cytosol | 62.81 | 62.26 |
| KRH31473 | Soybean | cytosol | 64.23 | 60.77 |
| Solyc05g015320.2.1 | Tomato | extracellular | 63.17 | 59.66 |
| PGSC0003DMT400074853 | Potato | cytosol | 62.81 | 59.33 |
| GSMUA_Achr11P... | Banana | nucleus | 54.63 | 53.39 |
| Os08t0531100-01 | Rice | cytosol | 45.55 | 52.46 |
| Zm00001d031619_P001 | Maize | nucleus | 50.89 | 48.39 |
| EES15312 | Sorghum | cytosol | 50.71 | 48.22 |
| TraesCS7B01G158100.1 | Wheat | cytosol, mitochondrion, nucleus | 50.0 | 47.63 |
| TraesCS7D01G261100.1 | Wheat | nucleus | 49.64 | 47.29 |
| TraesCS7A01G260100.2 | Wheat | nucleus | 49.64 | 47.29 |
| HORVU7Hr1G054130.4 | Barley | mitochondrion | 49.47 | 41.8 |
| AT4G26760.1 | Thale cress | cytosol | 42.17 | 41.0 |
| AT5G55230.2 | Thale cress | cytosol | 43.42 | 39.61 |
| AT2G38720.1 | Thale cress | nucleus | 37.72 | 38.55 |
| Zm00001d049816_P001 | Maize | nucleus | 18.15 | 37.36 |
| AT1G14690.1 | Thale cress | cytosol | 38.43 | 35.82 |
| AT2G01910.1 | Thale cress | nucleus | 37.72 | 34.87 |
| AT5G62250.1 | Thale cress | nucleus | 33.27 | 34.06 |
| AT5G51600.1 | Thale cress | cytosol | 37.72 | 29.99 |
| AT3G60840.1 | Thale cress | cytosol | 33.63 | 27.92 |
Protein Annotations
| Gene3D:1.20.58.1520 | MapMan:35.1 | EntrezGene:839685 | ProteinID:AAG51477.1 | ProteinID:AEE30891.1 | ArrayExpress:AT1G27920 |
| EnsemblPlantsGene:AT1G27920 | RefSeq:AT1G27920 | TAIR:AT1G27920 | RefSeq:AT1G27920-TAIR-G | EnsemblPlants:AT1G27920.1 | TAIR:AT1G27920.1 |
| ncoils:Coil | GO:GO:0000226 | GO:GO:0000910 | GO:GO:0000922 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005819 | GO:GO:0005856 | GO:GO:0005874 | GO:GO:0007049 | GO:GO:0008017 | GO:GO:0008150 |
| GO:GO:0009524 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0051301 | Symbol:MAP65-8 | InterPro:MAP65_Ase1_PRC1 |
| RefSeq:NP_174113.2 | PFAM:PF03999 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR19321 | PANTHER:PTHR19321:SF3 | UniProt:Q9C7G0 | UniParc:UPI0001D89747 |
| SEG:seg | : | : | : | : | : |
Description
MAP65-865-kDa microtubule-associated protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7G0]
Coordinates
chr1:+:9726655..9729848
Molecular Weight (calculated)
64606.9 Da
IEP (calculated)
6.850
GRAVY (calculated)
-0.726
Length
562 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLQTPIEM RSSSLLDTSC GYLLRELQMI WDEVGEDKFE REKVLLDIEQ ECVEAYRRKV DHANVSRSRL HQELAESEAE LTHFLLCLGE RSVPGRPEKK
101: GGTLREQLDS IAPALREMRL RKDERVKQFR SVKGEIQKIS AEIAGRSTYE DSTRKITIDD NDLSNKKLEE YQNELHRLHD EKNERLQKVD IYICAIRDLS
201: ATLGTEASMI ITKIHPSLND LYGISKNISD DILKKLNGTV VSLEEEKHKR LEKLHHLGRA LSNLWNLMDA SYEDRQKFFH VIDLLSSAPS DVCAPGSITL
301: DIIQQAEAEV KRLDQLKASR IKELFIKKQK ELEDTCNMSH METPSTEMGN ITNLVDSGEV DHVDLLAAMD EKIARAKEEA ASRKGIIEKV DRWMLASDEE
401: RWLEEYDQDE NRYSVSRNAH RNLRRAERAR ITVSKISGLV ESILVKAKSW EVERQKVFLY NEVPLVAMLQ EYNKLRQEKE MEKQRLREMK KMSIPQPVAE
501: GDNFYMARPA SSNRRISNRS MNGGFGSGSP INRKYSGGFN NTNNNYTALG TSIRRESRKS EA
101: GGTLREQLDS IAPALREMRL RKDERVKQFR SVKGEIQKIS AEIAGRSTYE DSTRKITIDD NDLSNKKLEE YQNELHRLHD EKNERLQKVD IYICAIRDLS
201: ATLGTEASMI ITKIHPSLND LYGISKNISD DILKKLNGTV VSLEEEKHKR LEKLHHLGRA LSNLWNLMDA SYEDRQKFFH VIDLLSSAPS DVCAPGSITL
301: DIIQQAEAEV KRLDQLKASR IKELFIKKQK ELEDTCNMSH METPSTEMGN ITNLVDSGEV DHVDLLAAMD EKIARAKEEA ASRKGIIEKV DRWMLASDEE
401: RWLEEYDQDE NRYSVSRNAH RNLRRAERAR ITVSKISGLV ESILVKAKSW EVERQKVFLY NEVPLVAMLQ EYNKLRQEKE MEKQRLREMK KMSIPQPVAE
501: GDNFYMARPA SSNRRISNRS MNGGFGSGSP INRKYSGGFN NTNNNYTALG TSIRRESRKS EA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.