Factsheet for AT2G01910.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17624	Canola	nucleus	91.78	91.78
Bra024843.1-P	Field mustard	nucleus	91.61	91.61
CDY03090	Canola	nucleus	88.49	86.63
CDY15798	Canola	endoplasmic reticulum, golgi	59.38	85.55
AT1G14690.1	Thale cress	cytosol	79.11	79.77
VIT_01s0011g06330.t01	Wine grape	nucleus	70.56	71.62
KRH40910	Soybean	cytosol, mitochondrion, nucleus	68.09	68.89
KRG89099	Soybean	cytosol	68.09	68.89
Solyc01g005080.2.1	Tomato	cytosol	61.84	67.26
PGSC0003DMT400075869	Potato	nucleus	66.12	67.11
Solyc04g008290.2.1	Tomato	nucleus	66.12	67.0
KRH09582	Soybean	cytosol, mitochondrion, nucleus	16.61	66.89
PGSC0003DMT400058659	Potato	cytosol, plastid	65.62	66.39
KRH46955	Soybean	cytosol	29.61	63.6
KRH01846	Soybean	extracellular	34.87	61.27
GSMUA_Achr6P23030_001	Banana	cytosol	56.58	61.21
GSMUA_Achr10P...	Banana	nucleus	57.73	58.11
EER98994	Sorghum	nucleus	55.92	57.05
TraesCS5D01G240800.1	Wheat	nucleus	55.1	56.88
Os09t0450300-01	Rice	nucleus	55.43	56.64
TraesCS5A01G233900.1	Wheat	nucleus	54.28	56.31
TraesCS5B01G232400.1	Wheat	nucleus	54.28	56.03
GSMUA_Achr6P04350_001	Banana	cytosol	57.89	55.87
TraesCS4A01G074200.2	Wheat	nucleus	54.93	54.66
TraesCS4D01G231800.3	Wheat	nucleus	54.77	54.5
TraesCS4B01G230500.2	Wheat	nucleus	54.61	54.34
Zm00001d020685_P002	Maize	cytosol	56.74	53.65
GSMUA_Achr6P05980_001	Banana	cytosol	52.47	53.61
Os03t0237600-04	Rice	nucleus	53.78	53.61
EER92583	Sorghum	cytosol	53.62	53.36
Zm00001d028363_P001	Maize	cytosol	53.62	53.36
Bra026625.1-P	Field mustard	mitochondrion	31.74	50.26
Os03t0719000-01	Rice	cytosol, nucleus	37.66	48.52
HORVU4Hr1G064580.2	Barley	endoplasmic reticulum, nucleus, plastid	54.77	46.12
TraesCS4A01G263800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.05	45.16
EER90980	Sorghum	cytosol	46.88	45.02
TraesCS4D01G051300.1	Wheat	cytosol	43.75	45.01
TraesCS4B01G051200.1	Wheat	nucleus	45.72	44.98
AT4G26760.1	Thale cress	cytosol	42.27	44.46
AT5G55230.2	Thale cress	cytosol	44.57	43.99
AT2G38720.1	Thale cress	nucleus	38.49	42.55
HORVU4Hr1G008440.3	Barley	nucleus	45.72	39.32
CDY09401	Canola	endoplasmic reticulum, golgi, plasma membrane	36.35	38.84
AT5G62250.1	Thale cress	nucleus	34.87	38.62
AT1G27920.1	Thale cress	nucleus	34.87	37.72
GSMUA_Achr2P21660_001	Banana	endoplasmic reticulum, extracellular	55.43	35.55
AT3G60840.1	Thale cress	cytosol	39.14	35.16
AT5G51600.1	Thale cress	cytosol	40.46	34.79
Zm00001d033794_P001	Maize	nucleus	45.89	27.62

Protein Annotations

Gene3D:1.20.58.1520	MapMan:35.1	EntrezGene:814722	ProteinID:AAD21782.1	ProteinID:AEC05516.1	ProteinID:AEC05517.1
EMBL:AK228964	EMBL:AK317525	ArrayExpress:AT2G01910	EnsemblPlantsGene:AT2G01910	RefSeq:AT2G01910	TAIR:AT2G01910
RefSeq:AT2G01910-TAIR-G	EnsemblPlants:AT2G01910.1	TAIR:AT2G01910.1	Symbol:ATMAP65-6	ncoils:Coil	GO:GO:0000226
GO:GO:0000910	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005739	GO:GO:0005856	GO:GO:0005874
GO:GO:0007049	GO:GO:0008017	GO:GO:0008150	GO:GO:0009524	GO:GO:0009536	GO:GO:0009574
GO:GO:0009987	GO:GO:0016043	GO:GO:0051301	InterPro:MAP65_Ase1_PRC1	RefSeq:NP_001030945.1	RefSeq:NP_178300.3
PFAM:PF03999	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	PANTHER:PTHR19321	PANTHER:PTHR19321:SF5	UniProt:Q9SIS3	UniParc:UPI00000A3647	SEG:seg

Description

MAP65-665-kDa microtubule-associated protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIS3]

Coordinates

chr2:+:416021..420661

Molecular Weight (calculated)

69410.6 Da

IEP (calculated)

7.344

GRAVY (calculated)

-0.685

Length

608 amino acids

Sequence
(BLAST)

001: MLEIGSPNAL FFRTNTTCNN LLRELQKIWV EIGETETEKD RMLMELEREC LQIYQRKVDE AANSKAKLHQ SVASIEAEVA SLMAALGVLN INSPIKLDKG
101: SKSLKEKLAA VTPLVEELRI QKEERMKQFS DIKAQIEKIS GEISGYSDHL NKAMNISLTL EEQDLTLRNL NEYQTHLRTL QKEKSDRLNK VLGYVNEVHA
201: LCGVLGVDFS QTVSAVHPSL HRTDQEQSTN ISDSTLEGLE HMIQKLKTER KSRFQKLKDV VASLFELWNL MDTPQEDRTK FGKVTYVVRS SEANITEPGI
301: LSTETIEQVS TEVDSLSKLK ASRMKELVMK RRSELEDLCR LTHIQPDTST SAEKSTALID SGLVDPSELL ANIEMQINKI KDEAQSRKDI MDRIDRWLSA
401: CEEENWLEEY NLDENRYSAG RGGHVNLKRA ERARVTINKI PGMVDTLIKK TLVWEEDMQK SFLYDGVRLV NILEDYKLTR KQQEEEKKRY RDQKKRQDLL
501: LTQRESIYGS KPSPRRSSSF RKPNGFNISN GNGSVPPTPR RGSVGTTTPD VLLTPRSYSG HHRQNGYFKE VRRLSTTPLN YVAMQKEDTV STTYTSIYSS
601: EPDSPLQG

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.