Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- golgi 4
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17624 | Canola | nucleus | 86.97 | 60.36 |
| AT2G01910.1 | Thale cress | nucleus | 85.55 | 59.38 |
| CDY03090 | Canola | nucleus | 81.99 | 55.72 |
| CDX81663 | Canola | cytosol | 73.46 | 51.84 |
| CDY33748 | Canola | cytosol | 72.27 | 51.09 |
| KRH09582 | Soybean | cytosol, mitochondrion, nucleus | 16.82 | 47.02 |
| VIT_01s0011g06330.t01 | Wine grape | nucleus | 65.64 | 46.24 |
| KRG89099 | Soybean | cytosol | 64.93 | 45.59 |
| KRH40910 | Soybean | cytosol, mitochondrion, nucleus | 64.69 | 45.42 |
| PGSC0003DMT400075869 | Potato | nucleus | 62.32 | 43.91 |
| Solyc04g008290.2.1 | Tomato | nucleus | 62.32 | 43.83 |
| PGSC0003DMT400058659 | Potato | cytosol, plastid | 61.61 | 43.26 |
| Solyc01g005080.2.1 | Tomato | cytosol | 56.4 | 42.58 |
| GSMUA_Achr6P23030_001 | Banana | cytosol | 55.21 | 41.46 |
| GSMUA_Achr10P... | Banana | nucleus | 56.87 | 39.74 |
| TraesCS4A01G074200.2 | Wheat | nucleus | 55.45 | 38.3 |
| GSMUA_Achr6P04350_001 | Banana | cytosol | 57.11 | 38.25 |
| TraesCS4D01G231800.3 | Wheat | nucleus | 55.21 | 38.13 |
| TraesCS4B01G230500.2 | Wheat | nucleus | 54.98 | 37.97 |
| Os03t0237600-04 | Rice | nucleus | 54.27 | 37.54 |
| TraesCS5D01G240800.1 | Wheat | nucleus | 52.37 | 37.52 |
| EER92583 | Sorghum | cytosol | 54.03 | 37.32 |
| EER98994 | Sorghum | nucleus | 52.61 | 37.25 |
| TraesCS5A01G233900.1 | Wheat | nucleus | 51.66 | 37.2 |
| TraesCS5B01G232400.1 | Wheat | nucleus | 51.9 | 37.18 |
| Zm00001d028363_P001 | Maize | cytosol | 53.55 | 36.99 |
| Os09t0450300-01 | Rice | nucleus | 52.13 | 36.97 |
| GSMUA_Achr6P05980_001 | Banana | cytosol | 48.58 | 34.45 |
| Zm00001d020685_P002 | Maize | cytosol | 52.37 | 34.37 |
| KRH01846 | Soybean | extracellular | 27.25 | 33.24 |
| HORVU4Hr1G064580.2 | Barley | endoplasmic reticulum, nucleus, plastid | 55.21 | 32.27 |
| KRH46955 | Soybean | cytosol | 21.56 | 32.16 |
| TraesCS4D01G051300.1 | Wheat | cytosol | 43.6 | 31.13 |
| TraesCS4A01G263800.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 43.6 | 29.68 |
| TraesCS4B01G051200.1 | Wheat | nucleus | 43.36 | 29.61 |
| CDY19902 | Canola | cytosol | 40.52 | 29.23 |
| CDY17313 | Canola | cytosol | 40.52 | 29.23 |
| EER90980 | Sorghum | cytosol | 43.84 | 29.23 |
| CDY09401 | Canola | endoplasmic reticulum, golgi, plasma membrane | 38.86 | 28.82 |
| CDY20777 | Canola | cytosol | 39.81 | 28.52 |
| CDX89305 | Canola | cytosol | 38.39 | 28.47 |
| Os03t0719000-01 | Rice | cytosol, nucleus | 31.75 | 28.39 |
| CDY14300 | Canola | nucleus | 39.1 | 28.35 |
| CDY06596 | Canola | cytosol | 39.34 | 28.18 |
| CDY36737 | Canola | nucleus | 41.0 | 27.46 |
| CDY12006 | Canola | cytosol | 41.0 | 26.86 |
| CDY18372 | Canola | nucleus | 36.26 | 25.93 |
| HORVU4Hr1G008440.3 | Barley | nucleus | 42.89 | 25.6 |
| CDX93308 | Canola | nucleus | 35.55 | 25.47 |
| CDY00270 | Canola | nucleus | 31.28 | 24.49 |
| CDX94287 | Canola | nucleus | 38.15 | 24.32 |
| CDX86911 | Canola | nucleus | 31.04 | 24.3 |
| CDY62713 | Canola | cytosol | 38.86 | 23.98 |
| CDX89081 | Canola | cytosol | 38.86 | 23.91 |
| CDX87240 | Canola | nucleus | 29.86 | 23.29 |
| GSMUA_Achr2P21660_001 | Banana | endoplasmic reticulum, extracellular | 51.66 | 23.0 |
| CDY16786 | Canola | nucleus | 28.91 | 22.47 |
| CDX84899 | Canola | extracellular, nucleus, plastid | 29.86 | 21.95 |
| CDY27637 | Canola | cytosol | 29.15 | 21.58 |
| CDX97365 | Canola | nucleus | 39.1 | 20.37 |
| Zm00001d033794_P001 | Maize | nucleus | 43.36 | 18.12 |
Protein Annotations
| Gene3D:1.20.58.1520 | MapMan:35.1 | GO:A0A078FTV9 | UniProt:A0A078FTV9 | EnsemblPlants:CDY15798 | ProteinID:CDY15798 |
| ProteinID:CDY15798.1 | ncoils:Coil | GO:GO:0000226 | GO:GO:0000910 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0007049 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| EnsemblPlantsGene:GSBRNA2T00090103001 | InterPro:MAP65_Ase1_PRC1 | PFAM:PF03999 | PANTHER:PTHR19321 | PANTHER:PTHR19321:SF5 | UniParc:UPI0004EE6D76 |
| SEG:seg | : | : | : | : | : |
Description
BnaC02g34170DBnaC02g34170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FTV9]
Coordinates
chrLK032058:+:148675..151421
Molecular Weight (calculated)
47906.5 Da
IEP (calculated)
9.567
GRAVY (calculated)
-0.472
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MIIFVCVLVW KGMIGITNAL FFRTNTTCNN LLRELRKIWV EIGESEAEKD RMLMELEREC LQIYQRKVDE AANSKARLHQ SVAAIQALIA SLVAALGVLN
101: INSPIKVDKS SKSLKEKLAA VTPLVENLRI QKEERLKDVV VSLFELWNLT DGLPQLTHIQ PDTRTSAEKS SALIDSGLVD PSELLGNIET QINKIKGEVQ
201: SRKDIVDRLD RWLSACEEET WLEEYNMDVN RYSAGRGGHV NLKRAERARV TINKIPAMVD NLIKKTLVWE DEAKSFLYDG VRLVNILEGY ILTRKQQEED
301: KKRYRDQKKR QDLLLTQRES IYGSKPIPRR SSSFRKPSGY TISNGNGSVP PTPRRSSVGT ATPDLLLTPR SYSGHHRQNG YFKEVRRLTP TPLNFVAIQK
401: EDTVSTTYTS IYSSEPDSSL QG
101: INSPIKVDKS SKSLKEKLAA VTPLVENLRI QKEERLKDVV VSLFELWNLT DGLPQLTHIQ PDTRTSAEKS SALIDSGLVD PSELLGNIET QINKIKGEVQ
201: SRKDIVDRLD RWLSACEEET WLEEYNMDVN RYSAGRGGHV NLKRAERARV TINKIPAMVD NLIKKTLVWE DEAKSFLYDG VRLVNILEGY ILTRKQQEED
301: KKRYRDQKKR QDLLLTQRES IYGSKPIPRR SSSFRKPSGY TISNGNGSVP PTPRRSSVGT ATPDLLLTPR SYSGHHRQNG YFKEVRRLTP TPLNFVAIQK
401: EDTVSTTYTS IYSSEPDSSL QG
001: MLMELERECL QIYQRKVDEA ANSKAKLHQS VASIEAEVAS LMAALGVLNI NSPIKLDKGS KSLKEKLAAV TPLVEELRIQ KEERMKQFSD IKAQIEKISG
101: EISGYSDHLN KAMNISLTLE EQDLTLRNLN EYQTHLRTLQ KEKSDRLNKV LGYVNEVHAL CGVLGVDFSQ TVSAVHPSLH RTDQEQSTNI SDSTLEGLEH
201: MIQKLKTERK SRFQKLKDVV ASLFELWNLM DTPQEDRTKF GKVTYVVRSS EANITEPGIL STETIEQVST EVDSLSKLKA SRMKELVMKR RSELEDLCRL
301: THIQPDTSTS AEKSTALIDS GLVDPSELLA NIEMQINKIK DEAQSRKDIM DRIDRWLSAC EEENWLEEYN LDENRYSAGR GGHVNLKRAE RARVTINKIP
401: GMVDTLIKKT LVWEEDMQKS FLYDGVRLVN ILEDYKLTRK QQEEEKKRYR DQKKRQDLLL TQRESIYGSK PSPRRSSSFR KPNGFNISNG NGSVPPTPRR
501: GSVGTTTPDV LLTPRSYSGH HRQNGYFKEV RRLSTTPLNY VAMQKEDTVS TTYTSIYSSE PDSPLQG
101: EISGYSDHLN KAMNISLTLE EQDLTLRNLN EYQTHLRTLQ KEKSDRLNKV LGYVNEVHAL CGVLGVDFSQ TVSAVHPSLH RTDQEQSTNI SDSTLEGLEH
201: MIQKLKTERK SRFQKLKDVV ASLFELWNLM DTPQEDRTKF GKVTYVVRSS EANITEPGIL STETIEQVST EVDSLSKLKA SRMKELVMKR RSELEDLCRL
301: THIQPDTSTS AEKSTALIDS GLVDPSELLA NIEMQINKIK DEAQSRKDIM DRIDRWLSAC EEENWLEEYN LDENRYSAGR GGHVNLKRAE RARVTINKIP
401: GMVDTLIKKT LVWEEDMQKS FLYDGVRLVN ILEDYKLTRK QQEEEKKRYR DQKKRQDLLL TQRESIYGSK PSPRRSSSFR KPNGFNISNG NGSVPPTPRR
501: GSVGTTTPDV LLTPRSYSGH HRQNGYFKEV RRLSTTPLNY VAMQKEDTVS TTYTSIYSSE PDSPLQG
Arabidopsis Description
MAP65-665-kDa microtubule-associated protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIS3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.