Factsheet for Bra024843.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17624	Canola	nucleus	99.84	99.84
AT2G01910.1	Thale cress	nucleus	91.61	91.61
Bra026811.1-P	Field mustard	cytosol, nucleus, plastid	77.8	79.5
VIT_01s0011g06330.t01	Wine grape	nucleus	71.05	72.12
KRH40910	Soybean	cytosol, mitochondrion, nucleus	68.26	69.05
KRG89099	Soybean	cytosol	68.26	69.05
PGSC0003DMT400075869	Potato	nucleus	66.45	67.45
Solyc04g008290.2.1	Tomato	nucleus	66.45	67.33
Solyc01g005080.2.1	Tomato	cytosol	60.86	66.19
PGSC0003DMT400058659	Potato	cytosol, plastid	64.64	65.39
KRH09582	Soybean	cytosol, mitochondrion, nucleus	16.12	64.9
KRH46955	Soybean	cytosol	29.61	63.6
GSMUA_Achr6P23030_001	Banana	cytosol	58.39	63.17
KRH01846	Soybean	extracellular	34.7	60.98
GSMUA_Achr10P...	Banana	nucleus	59.05	59.44
Os09t0450300-01	Rice	nucleus	57.57	58.82
EER98994	Sorghum	nucleus	57.07	58.22
TraesCS5D01G240800.1	Wheat	nucleus	55.92	57.73
TraesCS5A01G233900.1	Wheat	nucleus	55.26	57.34
TraesCS5B01G232400.1	Wheat	nucleus	55.26	57.05
GSMUA_Achr6P04350_001	Banana	cytosol	58.88	56.83
TraesCS4A01G074200.2	Wheat	nucleus	56.41	56.14
TraesCS4D01G231800.3	Wheat	nucleus	56.25	55.97
TraesCS4B01G230500.2	Wheat	nucleus	56.09	55.81
Os03t0237600-04	Rice	nucleus	54.93	54.75
EER92583	Sorghum	cytosol	54.93	54.66
GSMUA_Achr6P05980_001	Banana	cytosol	53.29	54.45
Zm00001d028363_P001	Maize	cytosol	54.61	54.34
Zm00001d020685_P002	Maize	cytosol	57.4	54.28
Bra026625.1-P	Field mustard	mitochondrion	32.57	51.56
Os03t0719000-01	Rice	cytosol, nucleus	37.83	48.73
HORVU4Hr1G064580.2	Barley	endoplasmic reticulum, nucleus, plastid	56.25	47.37
Bra002922.1-P	Field mustard	cytosol	44.9	46.67
TraesCS4A01G263800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	47.53	46.61
TraesCS4B01G051200.1	Wheat	nucleus	47.37	46.6
TraesCS4D01G051300.1	Wheat	cytosol	45.07	46.36
Bra028986.1-P	Field mustard	cytosol	44.41	45.92
Bra026405.1-P	Field mustard	cytosol	42.76	45.69
EER90980	Sorghum	cytosol	47.53	45.66
Bra010428.1-P	Field mustard	cytosol	43.09	45.02
Bra035564.1-P	Field mustard	cytosol	42.76	44.29
Bra017106.1-P	Field mustard	nucleus	39.47	43.72
HORVU4Hr1G008440.3	Barley	nucleus	47.2	40.59
Bra010069.1-P	Field mustard	nucleus	35.2	39.7
Bra035900.1-P	Field mustard	nucleus	33.72	37.89
Bra023930.1-P	Field mustard	cytosol	41.61	35.68
Bra028266.1-P	Field mustard	cytosol	41.45	35.64
GSMUA_Achr2P21660_001	Banana	endoplasmic reticulum, extracellular	55.43	35.55
Bra014467.1-P	Field mustard	cytosol	37.83	35.49
Bra032853.1-P	Field mustard	cytosol	33.22	33.44
Zm00001d033794_P001	Maize	nucleus	46.88	28.22

Protein Annotations

EnsemblPlants:Bra024843.1	EnsemblPlants:Bra024843.1-P	EnsemblPlantsGene:Bra024843	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0000910
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF5
PFAM:PF03999	SEG:seg	UniParc:UPI000253F933	UniProt:M4E7T7	MapMan:35.1	:

Description

AT2G01910 (E=6e-279) ATMAP65-6, MAP65-6 | ATMAP65-6; microtubule binding

Coordinates

chrA06:-:23770845..23773856

Molecular Weight (calculated)

69366.4 Da

IEP (calculated)

7.100

GRAVY (calculated)

-0.698

Length

608 amino acids

Sequence
(BLAST)

001: MLQVGSSNAL FFQTNTTCNN LLRELQQIWV EIGESEAEKD KMLMELEKEC LQIYQRKVDE AANSKARLHQ SVAAMEAEVA SLMAALGVLN INSPIKVDKS
101: SKSLKEKLAA VTPLVEELRI QKEERMKQFS DIKAQIEKIS GEISGYSEHL NKGMISSLTL EEQDLTLRKL NEYQTHLRTL QKEKSDRLNK VLGYVNEVHT
201: LCGVLGVDFS QTVCEVHPSL HRTDHEQSTN ISDNTLEGLD NMIQKLKTER RARFQKLKDV VASLFELWNL MDTPQEERTK FGRVTYVVRS SESSITEPGI
301: LSTETVEQVS AEVESLSKLK ASKMKELVMK RRSELEDLCR LTHIQPDTST SAEKSSALID SGLVDPSELL ANIEMQINKI KDEAQSRKDI MDRIDRWLSA
401: CEEENWLEEY NLDENRYSAG RGGHVNLKRA ERARVTINKI PAMVDNLIKK TLAWEEETQK SFLYDGVRLV NILEDYKLTR KQQEEEKKRY RDQKKRQDLL
501: LTQRESIYGS KPSPRRSSSF RKPNGYSISN GNGSMPPTPR RSSVGTTTPD LLLTPRSYSG HHRQNGYFKE VRRLTSTPLN YVAIQKEDTA STTYTSIYSS
601: EPDSPLQG

Best Arabidopsis Sequence Match ( AT2G01910.1 )
(BLAST)

001: MLEIGSPNAL FFRTNTTCNN LLRELQKIWV EIGETETEKD RMLMELEREC LQIYQRKVDE AANSKAKLHQ SVASIEAEVA SLMAALGVLN INSPIKLDKG
101: SKSLKEKLAA VTPLVEELRI QKEERMKQFS DIKAQIEKIS GEISGYSDHL NKAMNISLTL EEQDLTLRNL NEYQTHLRTL QKEKSDRLNK VLGYVNEVHA
201: LCGVLGVDFS QTVSAVHPSL HRTDQEQSTN ISDSTLEGLE HMIQKLKTER KSRFQKLKDV VASLFELWNL MDTPQEDRTK FGKVTYVVRS SEANITEPGI
301: LSTETIEQVS TEVDSLSKLK ASRMKELVMK RRSELEDLCR LTHIQPDTST SAEKSTALID SGLVDPSELL ANIEMQINKI KDEAQSRKDI MDRIDRWLSA
401: CEEENWLEEY NLDENRYSAG RGGHVNLKRA ERARVTINKI PGMVDTLIKK TLVWEEDMQK SFLYDGVRLV NILEDYKLTR KQQEEEKKRY RDQKKRQDLL
501: LTQRESIYGS KPSPRRSSSF RKPNGFNISN GNGSVPPTPR RGSVGTTTPD VLLTPRSYSG HHRQNGYFKE VRRLSTTPLN YVAMQKEDTV STTYTSIYSS
601: EPDSPLQG

Arabidopsis Description

MAP65-665-kDa microtubule-associated protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIS3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.