Factsheet for GSMUA_Achr4P26930_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

nucleus 2
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G370700.1	Wheat	plasma membrane	38.96	20.52
TraesCS7B01G275700.1	Wheat	golgi, mitochondrion, plasma membrane	38.65	19.12
Os06t0544100-01	Rice	plasma membrane	39.26	18.74
Zm00001d046178_P001	Maize	plasma membrane	38.34	18.74
EER88491	Sorghum	plasma membrane	38.04	17.97
Zm00001d053518_P001	Maize	plasma membrane	32.82	16.29
VIT_10s0003g01430.t01	Wine grape	cytosol	31.9	15.55
CDX77617	Canola	plasma membrane	31.6	15.54
Bra025053.1-P	Field mustard	plasma membrane	31.29	15.38
KRH58983	Soybean	plasma membrane	31.29	15.34
CDY39452	Canola	plasma membrane	31.29	15.34
EES06570	Sorghum	plasma membrane	30.98	15.26
KRH42879	Soybean	endoplasmic reticulum, plasma membrane	31.29	15.22
AT5G45800.1	Thale cress	plasma membrane, plastid, vacuole	30.98	15.17
Os02t0241100-01	Rice	plasma membrane	30.67	14.99
PGSC0003DMT400073289	Potato	plasma membrane	30.37	14.52
KRH11039	Soybean	plasma membrane	30.06	14.37
Solyc02g072520.2.1	Tomato	plasma membrane	30.06	14.37
HORVU7Hr1G089500.2	Barley	cytosol, peroxisome	22.39	13.2
KRH21247	Soybean	plastid	29.75	13.11
GSMUA_Achr1P15850_001	Banana	plasma membrane, vacuole	22.09	10.75
GSMUA_Achr7P05250_001	Banana	plasma membrane	22.09	10.57
TraesCS7A01G352300.1	Wheat	mitochondrion	15.03	10.38
GSMUA_Achr3P00970_001	Banana	plasma membrane, vacuole	22.09	10.27

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr4G26930_001	EnsemblPlants:GSMUA_Achr4P26930_001	EnsemblPlants:GSMUA_Achr4T26930_001	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0SSF5	PFAM:PF13855
PANTHER:PTHR45122	SMART:SM00369	SUPFAM:SSF52058	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI000296DA59
SEG:seg	:	:	:	:	:

Description

Putative Probable leucine-rich repeat receptor-like protein kinase IMK3 [Source:GMGC_GENE;Acc:GSMUA_Achr4G26930_001]

Coordinates

chr4:+:25970574..25971620

Molecular Weight (calculated)

34792.9 Da

IEP (calculated)

9.308

GRAVY (calculated)

0.053

Length

326 amino acids

Sequence
(BLAST)

001: MQRYFTISGG MGLCFFVAFS SLVLSLLHLP AAACSCGRSD CELIALAFRH VSGFQLPPPT GDCSLRLPSR NLSGAVSWMH LRSVSALRVL DLSGNALGGS
101: IPGGFWSAPA LLHVNLASNR LDGVLRVAGL AALPRLEDVD LSRNSLDSFP VGLEKLGRLR HLDLSHNSMR GVLPEGFPPI AGGLGYLDVS YNNFTGVVQP
201: EAVKKFGEPA FVEAGSLQFV SAARVVAHSS SPSRSLRRTR HRRSRKRKIT LLSAILSVAA VAIILVALWY LHRVDKEEQR AREEKEGGAA TVGDEAGGAV
301: QKADEGDVEV REGVSAGKGQ AEQPHV

Best Arabidopsis Sequence Match ( AT5G45800.2 )
(BLAST)

001: MFLKLFLLLS LVSFSHSDSS STVSCPNGTD FHQLTTVFRY VSGFNSSWFS SNCSAVITHV VLPSRKLNGT VSWNPIRNLT RLRVLDLSNN SLDGSLPTWL
101: WSMPGLVSVN LSRNRFGGSI RVIPVNGSVL SAVKELNLSF NRFKHAVNFT GFTNLTTLDL SHNSLGVLPL GLGSLSGLRH LDISRCKING SVKPISGLKS
201: LDYLDLSENS MNGSFPVDFP NLNHLQFLNL SANRFSGSVG FDKYRKFGKS AFLHGGDFVF NDSKIPYHHR IHRLPHRHPP PVRQRNVKTH RTNHTPLVIG
301: LSSSLGALII VIFAAAIILI RRRMKSARTK SRWAISNPTP LDFKMEKSGP FEFGTESGSS WVADIKEPTA APVVMASKPL MNLTFKDLIV ATSHFGTESV
401: ISDGTCGPLY RAVLPGDLHV AIKVLERIRD VDQNDAVTAF EALTRLKHPN LLTLSGYCIA GLFHLVFLLV DDWDDFKICA DKSHPLLWDS

Arabidopsis Description

MEE62MEE62 [Source:UniProtKB/TrEMBL;Acc:A0A178UKF2]
SUBAcon: [plasma membrane,plastid,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.