Factsheet for VIT_10s0003g01430.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073289	Potato	plasma membrane	61.29	60.12
Solyc02g072520.2.1	Tomato	plasma membrane	60.54	59.38
KRH11039	Soybean	plasma membrane	59.79	58.65
KRH58983	Soybean	plasma membrane	56.95	57.29
KRH42879	Soybean	endoplasmic reticulum, plasma membrane	56.2	56.12
CDY39452	Canola	plasma membrane	54.86	55.19
Bra025053.1-P	Field mustard	plasma membrane	54.56	55.05
CDX77617	Canola	plasma membrane	54.56	55.05
KRH21247	Soybean	plastid	60.24	54.46
AT5G45800.1	Thale cress	plasma membrane, plastid, vacuole	53.21	53.45
TraesCS7A01G352300.1	Wheat	mitochondrion	30.79	43.64
HORVU7Hr1G089500.2	Barley	cytosol, peroxisome	34.68	41.95
TraesCS7B01G275700.1	Wheat	golgi, mitochondrion, plasma membrane	40.06	40.67
Zm00001d046178_P001	Maize	plasma membrane	39.61	39.73
TraesCS7D01G370700.1	Wheat	plasma membrane	36.62	39.58
EER88491	Sorghum	plasma membrane	39.31	38.12
Os06t0544100-01	Rice	plasma membrane	38.86	38.07
Zm00001d053518_P001	Maize	plasma membrane	36.92	37.6
Os02t0241100-01	Rice	plasma membrane	36.62	36.73
EES06570	Sorghum	plasma membrane	35.73	36.1
GSMUA_Achr4P26930_001	Banana	extracellular, plasma membrane	15.55	31.9
VIT_11s0016g00040.t01	Wine grape	plasma membrane	36.62	28.72

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100261772	wikigene:100261772	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10
EMBL:AM450566	ProteinID:CAN69833	ProteinID:CAN69833.1	ProteinID:CCB55694	ProteinID:CCB55694.1	ncoils:Coil
UniProt:F6HMA6	EMBL:FN595992	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0006970	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009625	GO:GO:0009628	GO:GO:0009719
GO:GO:0009733	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0046777	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100261772	wikigene:LOC100261772	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF07714	PFAM:PF13516	PFAM:PF13855	PFscan:PS50011
PFscan:PS51450	PANTHER:PTHR45122	PANTHER:PTHR45122:SF1	InterPro:Prot_kinase_dom	SMART:SM00369	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix	UniParc:UPI000198404F	ArrayExpress:VIT_10s0003g01430	EnsemblPlantsGene:VIT_10s0003g01430
EnsemblPlants:VIT_10s0003g01430.t01	unigene:Vvi.7465	RefSeq:XP_002265984	RefSeq:XP_002265984.2	SEG:seg	:

Description

No Description!

Coordinates

chr10:+:2817857..2820723

Molecular Weight (calculated)

74019.1 Da

IEP (calculated)

9.461

GRAVY (calculated)

-0.239

Length

669 amino acids

Sequence
(BLAST)

001: MVVAAESTCN STTDSKLVLK AFKGVTGFNS SWVKSHDHGN CSSPPMRELK FSSRNLSGTI SWEFLRNMSQ LQAIDLSHNS LRGHVPGWFW SIRSLVKVNL
101: SQNRFGGSVG FEGLGSTSSM QVLNLSDNRF TNLVRLSGFQ ALTVLDLSNN DLRVLPSGFE NLTKLEHLDI SSCNISGNLK PISSLRRLTH LDVSDNNMNG
201: TFPSDFPPLI GLRFLNVSLN KFTGLIGSEF HKKFGNSAFI HAGNFNVSKT ATPPIGPHST PLPHKPLLEL RPHSSTPPHK PLPEHLAKKK RKSKPKLLVL
301: SLSCASAFLV LAMAICTYCM YRRRKLKRRN RWAISKPMQA EFKMEKSGPF SFETESGTSW VADIKEPSSA PVVMFEKPLM NLTFKDLIAA TSHFGKESQL
401: AEGRCGPVYR AVLPGDIHVA IKVLENARSV DHNDAVPMFE SLARLKHPNL LPLSGYCIAG REKLVLYEFM ANGDLHRWLH ELPTGAPNVE DWSTDTWEHI
501: NDGESVSRAS SPEKMEWRTR HRIAVGVARG LAYLHHAGSK PIFHGHLVAS NVLLADDFEP RIADFGLRRD RDIGNTEADV YCFGVVLIEL LTGKPGSEET
601: IAWARKLVKD RLGVNALDPR LGVGGDSVSE MVECLRVGYL CTAESPGKRP TMQQVVGLLK DIHPGPELN

Best Arabidopsis Sequence Match ( AT5G45800.1 )
(BLAST)

001: MFLKLFLLLS LVSFSHSDSS STVSCPNGTD FHQLTTVFRY VSGFNSSWFS SNCSAVITHV VLPSRKLNGT VSWNPIRNLT RLRVLDLSNN SLDGSLPTWL
101: WSMPGLVSVN LSRNRFGGSI RVIPVNGSVL SAVKELNLSF NRFKHAVNFT GFTNLTTLDL SHNSLGVLPL GLGSLSGLRH LDISRCKING SVKPISGLKS
201: LDYLDLSENS MNGSFPVDFP NLNHLQFLNL SANRFSGSVG FDKYRKFGKS AFLHGGDFVF NDSKIPYHHR IHRLPHRHPP PVRQRNVKTH RTNHTPLVIG
301: LSSSLGALII VIFAAAIILI RRRMKSARTK SRWAISNPTP LDFKMEKSGP FEFGTESGSS WVADIKEPTA APVVMASKPL MNLTFKDLIV ATSHFGTESV
401: ISDGTCGPLY RAVLPGDLHV AIKVLERIRD VDQNDAVTAF EALTRLKHPN LLTLSGYCIA GKEKLILYEF MANGDLHRWL HELPAGETNV EDWSADTWES
501: HVGDSSPEKT NWLIRHRIAI GVARGLAYLH HVGTTHGHLV ATNILLTETL EPRISDFGIN NIARTGDDTN KNNVEFDVYS FGVILFELLT GKQGSDENVK
601: SVRRLVKERR GEEALDSRLR LAAGESVNEM VESLRIGYFC TAETPVKRPT MQQVLGLLKD IRTVSR

Arabidopsis Description

MEE62MEE62 [Source:UniProtKB/TrEMBL;Acc:A0A178UKF2]
SUBAcon: [plasma membrane,plastid,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.