Factsheet for Solyc02g072520.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 7
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
ChloroP:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073289	Potato	plasma membrane	87.98	87.98
VIT_10s0003g01430.t01	Wine grape	cytosol	59.38	60.54
KRH42879	Soybean	endoplasmic reticulum, plasma membrane	54.69	55.67
KRH11039	Soybean	plasma membrane	55.43	55.43
KRH58983	Soybean	plasma membrane	53.96	55.34
Bra025053.1-P	Field mustard	plasma membrane	50.88	52.34
CDY39452	Canola	plasma membrane	50.88	52.18
AT5G45800.1	Thale cress	plasma membrane, plastid, vacuole	50.73	51.95
CDX77617	Canola	plasma membrane	50.44	51.89
KRH21247	Soybean	plastid	55.43	51.08
TraesCS7A01G352300.1	Wheat	mitochondrion	28.59	41.31
HORVU7Hr1G089500.2	Barley	cytosol, peroxisome	32.7	40.33
TraesCS7B01G275700.1	Wheat	golgi, mitochondrion, plasma membrane	37.83	39.15
Zm00001d046178_P001	Maize	plasma membrane	37.1	37.93
TraesCS7D01G370700.1	Wheat	plasma membrane	34.16	37.64
EER88491	Sorghum	plasma membrane	37.68	37.25
Os06t0544100-01	Rice	plasma membrane	36.66	36.6
EES06570	Sorghum	plasma membrane	35.34	36.4
Zm00001d053518_P001	Maize	plasma membrane	34.75	36.07
Os02t0241100-01	Rice	plasma membrane	33.87	34.63
GSMUA_Achr4P26930_001	Banana	extracellular, plasma membrane	14.37	30.06
Solyc07g005540.1.1	Tomato	plasma membrane	34.31	27.37

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000003	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0006970
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009625
GO:GO:0009628	GO:GO:0009719	GO:GO:0009733	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0046777	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	UniProt:K4B8M6	InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF07714	PFAM:PF13855
PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR45122	PANTHER:PTHR45122:SF1	InterPro:Prot_kinase_dom	SMART:SM00369
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc02g072520.2	EnsemblPlants:Solyc02g072520.2.1
TMHMM:TMhelix	UniParc:UPI0002767762	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2:-:41703245..41706664

Molecular Weight (calculated)

76379.2 Da

IEP (calculated)

9.990

GRAVY (calculated)

-0.188

Length

682 amino acids

Sequence
(BLAST)

001: MKILFTLFIF LSLFTFSKSE SPCRNNTDVD SSLVFKAFSS VYGFNISWFS SNCSSPITEI NLSSRNLTGI VSWKYLKNLS HLHSIDLSNN SLKGSVHPLF
101: WSISSLVQVN LSKNKLGGAV AVARSSSSIQ RLDLSFNRFT NLGSVFYGFP NLTSLDLSHN DIKFLPFWFT NLTKLENLSI SSCNIYGNPK PLSHIKSLKH
201: LDVSVNHMDG KLPNDFPPLS SLNFLNISFN NFTGEIPKDQ FAKFGNSSFF HAGHLQIKNL LPNPKNSSQL RIKNHNFTTP THKKMLPLRH KPVKPNTHKK
301: EPKSRKKVLT VALSSASAFL ILVMGLVILC LYKRKKQMAR KNKWLISKPI QIPFRMDKSG PFSFETESGN SWVADIKEPS SAGVVMFEKP LMNLTFKDLI
401: AATSHFGKES LLAEGRCGPV YRAVLPGDLH VAIKVLEHAR ELSHDDAIAL FEQLSRIKHP NLLPISGYCI AGKEKLVLYE FMSNGDLHRW LHELPTATTN
501: VEDWTTDTWE LQNGSQITSP GKMEWHTRHR IAVGVARGLA YLHHAQSKPV VHGHLVLSNV LLADDFEPRI ADFGLSRNQA EGSSEMDVYD FGVVLVELLT
601: GKIGSDETIK WVRRLVKDGN GADALDSRLK LGGDSVSEMV ECLRVGYLCT AEAPNKRPRM QQVLGLLKDI QPHYQLGKTQ NL

Best Arabidopsis Sequence Match ( AT5G45800.1 )
(BLAST)

001: MFLKLFLLLS LVSFSHSDSS STVSCPNGTD FHQLTTVFRY VSGFNSSWFS SNCSAVITHV VLPSRKLNGT VSWNPIRNLT RLRVLDLSNN SLDGSLPTWL
101: WSMPGLVSVN LSRNRFGGSI RVIPVNGSVL SAVKELNLSF NRFKHAVNFT GFTNLTTLDL SHNSLGVLPL GLGSLSGLRH LDISRCKING SVKPISGLKS
201: LDYLDLSENS MNGSFPVDFP NLNHLQFLNL SANRFSGSVG FDKYRKFGKS AFLHGGDFVF NDSKIPYHHR IHRLPHRHPP PVRQRNVKTH RTNHTPLVIG
301: LSSSLGALII VIFAAAIILI RRRMKSARTK SRWAISNPTP LDFKMEKSGP FEFGTESGSS WVADIKEPTA APVVMASKPL MNLTFKDLIV ATSHFGTESV
401: ISDGTCGPLY RAVLPGDLHV AIKVLERIRD VDQNDAVTAF EALTRLKHPN LLTLSGYCIA GKEKLILYEF MANGDLHRWL HELPAGETNV EDWSADTWES
501: HVGDSSPEKT NWLIRHRIAI GVARGLAYLH HVGTTHGHLV ATNILLTETL EPRISDFGIN NIARTGDDTN KNNVEFDVYS FGVILFELLT GKQGSDENVK
601: SVRRLVKERR GEEALDSRLR LAAGESVNEM VESLRIGYFC TAETPVKRPT MQQVLGLLKD IRTVSR

Arabidopsis Description

MEE62MEE62 [Source:UniProtKB/TrEMBL;Acc:A0A178UKF2]
SUBAcon: [plasma membrane,plastid,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.