Skip to main content
crop-pal logo
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 8
  • golgi 4
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400090109 Potato plasma membrane 98.13 98.13
VIT_11s0016g00040.t01 Wine grape plasma membrane 73.33 73.51
KRH54956 Soybean plasma membrane 68.19 68.11
KRH26100 Soybean plasma membrane 57.66 67.72
KRH72299 Soybean plasma membrane 67.25 67.33
AT2G24230.1 Thale cress plasma membrane 67.02 67.17
CDY67752 Canola plasma membrane 63.63 65.7
Bra032115.1-P Field mustard plasma membrane 65.26 65.57
CDY39700 Canola plasma membrane 57.89 63.3
GSMUA_Achr3P00970_001 Banana plasma membrane, vacuole 47.95 58.49
GSMUA_Achr1P15850_001 Banana plasma membrane, vacuole 45.73 58.36
GSMUA_Achr7P05250_001 Banana plasma membrane 46.2 58.0
Os08t0276400-01 Rice plasma membrane 55.67 57.56
TraesCS5D01G190000.1 Wheat plasma membrane 54.15 55.72
TraesCS5B01G183000.1 Wheat plasma membrane 54.04 55.46
Zm00001d050148_P001 Maize plasma membrane 53.45 54.28
OQU80339 Sorghum plasma membrane 46.9 51.81
TraesCS5A01G185000.1 Wheat plasma membrane, plastid 54.15 50.94
HORVU5Hr1G056350.4 Barley plastid 53.68 49.57
Solyc02g072520.2.1 Tomato plasma membrane 27.37 34.31
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.7Gene3D:3.30.200.20Gene3D:3.80.10.10GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR001611
InterPro:IPR032675UniProt:K4CB26InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF07714PFAM:PF13516PFAM:PF13855PRINTS:PR00019PFscan:PS50011PFscan:PS51450
PANTHER:PTHR44913InterPro:Prot_kinase_domSMART:SM00220SMART:SM00365SMART:SM00369SUPFAM:SSF52058
SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domSignalP:SignalP-noTMEnsemblPlantsGene:Solyc07g005540.1EnsemblPlants:Solyc07g005540.1.1TMHMM:TMhelix
UniParc:UPI000276BFB5SEG:seg::::
Description
No Description!
Coordinates
chr7:+:436097..438664
Molecular Weight (calculated)
94611.1 Da
IEP (calculated)
6.419
GRAVY (calculated)
-0.107
Length
855 amino acids
Sequence
(BLAST)
001: MGIGILGSFL LLTVFFRPLL CQQPNTDGFF VSDFLQKMGV TKVHNFSAHF CSWQGVGCDS KDENVVNLTA KSFGLSGVIP DNTIGKLTKL KYLDLSNNKL
101: TGLPSDIWSL GSLKYLNLSH NHISGDLSSN VGNFGVLEIM DFSVNNFSGK IPDAISSLSS LHSLNLSKNL FDSEIPSGIS GCHSLESLDL SENRLTGFPN
201: DFGSTFHKLK FLNLAENEIL GKDSDFSRMD SITHINISGN LFKGSVVGLF EGPLEVIDLS RNQFDGHISQ VNFSSSFDWS HLVYLDLSEN HLSGEIIKEL
301: KNARNLLYLN LADNRFSHQE FPQTDMLSSL EYLNLSGTSL IGQIPQELSS LSRLKILDIS KNHLSKRIPP LSNRNLLVLD VSYNNLTGDI PLPLVEILPR
401: MERFNFSYNN LTLCATEFSS KTLLSAFMGS SNGCPIAANP ALFHKKAPKH RGLKLALALT FSMVFLLLGL LFLAFGCRRK TTIWAVKQNS YKEEQTISGP
501: FSFQTDSTTW VADVKQANSV PVVIFEKPLL NFTFADLLSA TSNFDRGTLL AEGRFGPVYR GFLPGGIHVA VKVLVHGSTM TDHEAARELE YLGRIKHPNL
601: VPLTGYCLAG EQRIAIYDYM ENGNLQNLLH DLPLGVRTTT EDWSTDTWEE EDDINSIQNV GSEGLLTTWR FRHKIALGTA RALAFLHHGC SPPIIHRDVK
701: ASSVYLDMNL EPRLSDFGLA KIFGTGPEDE ITRGSPGYIP PEFLHPESSS PKYPTPKSDV YGFGVILFEL ITGKKPVEDD YPQHNDGNLV GWVRGLVRNN
801: EGSIVIDQKI RGTASQTQIL EALKIGYLCT AEVPAKRPSM HQVVGLLKDI EPSQQ
Best Arabidopsis Sequence Match ( AT2G24230.1 )
(BLAST)
001: MGLGLGFWGY ALFLSLFLKQ SHCQEPNTDG FFVSEFYKQM GLSSSQAYNF SAPFCSWQGL FCDSKNEHVI MLIASGMSLS GQIPDNTIGK LSKLQSLDLS
101: NNKISALPSD FWSLNTLKNL NLSFNKISGS FSSNVGNFGQ LELLDISYNN FSGAIPEAVD SLVSLRVLKL DHNGFQMSIP RGLLGCQSLV SIDLSSNQLE
201: GSLPDGFGSA FPKLETLSLA GNKIHGRDTD FADMKSISFL NISGNQFDGS VTGVFKETLE VADLSKNRFQ GHISSQVDSN WFSLVYLDLS ENELSGVIKN
301: LTLLKKLKHL NLAWNRFNRG MFPRIEMLSG LEYLNLSNTN LSGHIPREIS KLSDLSTLDV SGNHLAGHIP ILSIKNLVAI DVSRNNLTGE IPMSILEKLP
401: WMERFNFSFN NLTFCSGKFS AETLNRSFFG STNSCPIAAN PALFKRKRSV TGGLKLALAV TLSTMCLLIG ALIFVAFGCR RKTKSGEAKD LSVKEEQSIS
501: GPFSFQTDST TWVADVKQAN AVPVVIFEKP LLNITFSDLL SATSNFDRDT LLADGKFGPV YRGFLPGGIH VAVKVLVHGS TLSDQEAARE LEFLGRIKHP
601: NLVPLTGYCI AGDQRIAIYE YMENGNLQNL LHDLPFGVQT TDDWTTDTWE EETDNGTQNI GTEGPVATWR FRHKIALGTA RALAFLHHGC SPPIIHRDVK
701: ASSVYLDQNW EPRLSDFGLA KVFGNGLDDE IIHGSPGYLP PEFLQPEHEL PTPKSDVYCF GVVLFELMTG KKPIEDDYLD EKDTNLVSWV RSLVRKNQAS
801: KAIDPKIQET GSEEQMEEAL KIGYLCTADL PSKRPSMQQV VGLLKDIEPK SNQ
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Source:UniProtKB/Swiss-Prot;Acc:C0LGK9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.