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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d050148_P001 Maize plasma membrane 84.24 77.43
Os08t0276400-01 Rice plasma membrane 74.94 70.13
TraesCS5D01G190000.1 Wheat plasma membrane 75.19 70.04
TraesCS5B01G183000.1 Wheat plasma membrane 74.81 69.51
TraesCS5A01G185000.1 Wheat plasma membrane, plastid 74.55 63.48
HORVU5Hr1G056350.4 Barley plastid 73.9 61.77
GSMUA_Achr3P00970_001 Banana plasma membrane, vacuole 49.22 54.35
GSMUA_Achr7P05250_001 Banana plasma membrane 46.38 52.72
GSMUA_Achr1P15850_001 Banana plasma membrane, vacuole 43.15 49.85
VIT_11s0016g00040.t01 Wine grape plasma membrane 53.62 48.65
CDY39700 Canola plasma membrane 47.42 46.93
PGSC0003DMT400090109 Potato plasma membrane 51.81 46.9
Solyc07g005540.1.1 Tomato plasma membrane 51.81 46.9
KRH54956 Soybean plasma membrane 51.81 46.85
KRH72299 Soybean plasma membrane 51.42 46.6
CDY67752 Canola plasma membrane 49.61 46.38
KRH26100 Soybean plasma membrane 43.54 46.29
AT2G24230.1 Thale cress plasma membrane 49.61 45.02
Bra032115.1-P Field mustard plasma membrane 49.22 44.77
EES06570 Sorghum plasma membrane 22.09 25.83
EER88491 Sorghum plasma membrane 22.61 25.36
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.7Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A1Z5R9U2GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtyp
EnsemblPlants:OQU80339ProteinID:OQU80339ProteinID:OQU80339.1PFAM:PF00069PFAM:PF00560PFAM:PF07714
PFAM:PF13855PRINTS:PR00019PFscan:PS50011PFscan:PS51450PANTHER:PTHR44913InterPro:Prot_kinase_dom
SMART:SM00369EnsemblPlantsGene:SORBI_3007G113300SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI000B8BB08DSEG:seg:::
Description
hypothetical protein
Coordinates
chr7:+:44395897..44398984
Molecular Weight (calculated)
83020.6 Da
IEP (calculated)
5.314
GRAVY (calculated)
0.107
Length
774 amino acids
Sequence
(BLAST)
001: MVCCHGGRRS AGILFFAVAV AACAAAAAQE PNTDAYFVSR FLSKLGRAAP SSSGANGVCF WPGVSCDGEG RVVAFVAAGM DLAGAIPEDT VGKLGRLQVL
101: DLSGNRLTAL PNDLWELGAS LSALNLSGNA IRGALPNNVG NFARLKVLDV SHNAFTGALP QALGSITGLQ VLNASHNQFQ GQVPNAIVFG CVNVVAMDLS
201: GNALDGGLPD LWPLRSLSHL NLSGNRLGGY IMGAFQEQLR VIDLSNNAFS GLNFSSGYAG SALMYLDLSG NELTGEFTIA GRFQNLRHVN LAHNQLCNAN
301: LLESMGEISG LEYVNLSSTG LHGQIPADFS SRLVGLKVLD LSRNNINGVV PDISSLCLYV LDLSVNNLTG EIPVALVKKL ASMDRFNFSY NNLTVCASEL
401: SPEAFAAAFA RSRNDCPIAV NPDSIKKSRG KRKWIKLVLA VVLFLFFSVL GLLCLAVACR SWRKRCDALP VVKQVSFKEE PAASGPFSFQ TDSTTWVADV
501: KVATSVPVVI FEKPLLSFTF ADLLAATSEF DRGTLLAEGR FGPVYRGFLP GGIQVAVKVL VHGSVMEDQD AARELERLGR IKHANLVPLT GYCLAGDQRI
601: AIYDFMENGN LHNLLHDLPL GVQATEDWSG DTWEDNIGGV ATEIITPEDC SPRCEGYAPP EFSNSENAMA TVKSDIYSFG VVLFELVTGK KPLGDEYPDQ
701: KEASLVNWAR AMVKANHGPS IIDPKIRDTG LERQMEEALR IAYLCTAELP SKRPAMQQIV GLLKDIEPKV EEGD
Best Arabidopsis Sequence Match ( AT2G24230.1 )
(BLAST)
001: MGLGLGFWGY ALFLSLFLKQ SHCQEPNTDG FFVSEFYKQM GLSSSQAYNF SAPFCSWQGL FCDSKNEHVI MLIASGMSLS GQIPDNTIGK LSKLQSLDLS
101: NNKISALPSD FWSLNTLKNL NLSFNKISGS FSSNVGNFGQ LELLDISYNN FSGAIPEAVD SLVSLRVLKL DHNGFQMSIP RGLLGCQSLV SIDLSSNQLE
201: GSLPDGFGSA FPKLETLSLA GNKIHGRDTD FADMKSISFL NISGNQFDGS VTGVFKETLE VADLSKNRFQ GHISSQVDSN WFSLVYLDLS ENELSGVIKN
301: LTLLKKLKHL NLAWNRFNRG MFPRIEMLSG LEYLNLSNTN LSGHIPREIS KLSDLSTLDV SGNHLAGHIP ILSIKNLVAI DVSRNNLTGE IPMSILEKLP
401: WMERFNFSFN NLTFCSGKFS AETLNRSFFG STNSCPIAAN PALFKRKRSV TGGLKLALAV TLSTMCLLIG ALIFVAFGCR RKTKSGEAKD LSVKEEQSIS
501: GPFSFQTDST TWVADVKQAN AVPVVIFEKP LLNITFSDLL SATSNFDRDT LLADGKFGPV YRGFLPGGIH VAVKVLVHGS TLSDQEAARE LEFLGRIKHP
601: NLVPLTGYCI AGDQRIAIYE YMENGNLQNL LHDLPFGVQT TDDWTTDTWE EETDNGTQNI GTEGPVATWR FRHKIALGTA RALAFLHHGC SPPIIHRDVK
701: ASSVYLDQNW EPRLSDFGLA KVFGNGLDDE IIHGSPGYLP PEFLQPEHEL PTPKSDVYCF GVVLFELMTG KKPIEDDYLD EKDTNLVSWV RSLVRKNQAS
801: KAIDPKIQET GSEEQMEEAL KIGYLCTADL PSKRPSMQQV VGLLKDIEPK SNQ
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Source:UniProtKB/Swiss-Prot;Acc:C0LGK9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.