CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 7
golgi 4
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54956	Soybean	plasma membrane	91.48	77.8
KRH72299	Soybean	plasma membrane	78.85	67.21
VIT_11s0016g00040.t01	Wine grape	plasma membrane	70.05	59.79
AT2G24230.1	Thale cress	plasma membrane	67.99	58.03
PGSC0003DMT400090109	Potato	plasma membrane	67.99	57.89
Solyc07g005540.1.1	Tomato	plasma membrane	67.72	57.66
CDY67752	Canola	plasma membrane	65.38	57.49
Bra032115.1-P	Field mustard	plasma membrane	67.17	57.46
CDY39700	Canola	plasma membrane	57.28	53.32
GSMUA_Achr1P15850_001	Banana	plasma membrane, vacuole	48.35	52.54
GSMUA_Achr7P05250_001	Banana	plasma membrane	46.15	49.34
GSMUA_Achr3P00970_001	Banana	plasma membrane, vacuole	47.12	48.93
Os08t0276400-01	Rice	plasma membrane	55.08	48.49
TraesCS5D01G190000.1	Wheat	plasma membrane	53.3	46.69
TraesCS5B01G183000.1	Wheat	plasma membrane	53.3	46.58
Zm00001d050148_P001	Maize	plasma membrane	53.3	46.08
OQU80339	Sorghum	plasma membrane	46.29	43.54
TraesCS5A01G185000.1	Wheat	plasma membrane, plastid	53.85	43.12
HORVU5Hr1G056350.4	Barley	plastid	52.75	41.47
KRH11039	Soybean	plasma membrane	30.22	32.26
KRH58983	Soybean	plasma membrane	26.37	28.87
KRH42879	Soybean	endoplasmic reticulum, plasma membrane	25.69	27.91
KRH21247	Soybean	plastid	27.88	27.43

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EMBL:ACUP02007541	ncoils:Coil
EnsemblPlantsGene:GLYMA_12G152400	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	UniProt:K7LV24	EnsemblPlants:KRH26100
ProteinID:KRH26100	ProteinID:KRH26100.1	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF00560	PFAM:PF07714	PFAM:PF13855	PRINTS:PR00019	PFscan:PS50011	PFscan:PS51450
PANTHER:PTHR44913	InterPro:Prot_kinase_dom	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296CDAC	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr12:+:22999698..23002260

Molecular Weight (calculated)

79746.9 Da

IEP (calculated)

6.818

GRAVY (calculated)

0.002

Length

728 amino acids

Sequence
(BLAST)

001: MGLGVFGSIL ILTLFFKHLA SQQPNTDDFF VSEFLKKMGL ATPQVYNFSA SVCYGVSCDA KREHVVGLLK SLNLSSNQIS GSLTNNIGNF GLLHVFDLSS
101: NNFSGQIPEA ISSLMSLKVL KLNHNRFEQR LPSGILRCHS LVSIDLSSNQ LSGAIPDGFG DAFPNLITLN LAGNSIHGSD SDISGLKSIV SLNISGNSFH
201: GSVMSLFHGR LEVMDLSRNQ FEGHISQIEI ILGLEYLNLS KTSLIGYIPA EISQLSNLSA LDVSINHLTG KIPLLSNKNL QVLDLSNNNL SGDVPSSVIE
301: KLPLMEKYNF SYNNLTFCAL EIKPAILQTV FYGSVNSFPI AANPSLLKKR ATQDKGMKLA LALTLSMICL VAGVLRLAFG CLKKTKPWLV KQTSYKEEHN
401: MSGPFSFHTD STTWVADVKQ ATSVPVIIFD KPQLNITFAD LLDANSNFDS GTLLAEGKFG PVYRGFLPGG IHVAVKVLVV GSTLTDKEAA RELEYLGRIK
501: HPNLVPLTGY CVAGDQRIAI YDYMENGNLQ NLLYDLPLGV LQRTDDWSTD TWEEDDGSNG IQNAGSEGVL TTWRFRHKIA LGTARALAFL HHGCSPPIIH
601: RDVKASRICG SGLDEEIALC SPGYAPPEFY QPEFDASILK SDVYCFGVVL FELLTGKKPV GDDYPDEKES TLVSWVRRLV RKNKSPNAID RKFEALKIGY
701: LCTADHPFKR PSMQQIVGLL KDIEPSAN

Best Arabidopsis Sequence Match ( AT2G24230.1 )
(BLAST)

001: MGLGLGFWGY ALFLSLFLKQ SHCQEPNTDG FFVSEFYKQM GLSSSQAYNF SAPFCSWQGL FCDSKNEHVI MLIASGMSLS GQIPDNTIGK LSKLQSLDLS
101: NNKISALPSD FWSLNTLKNL NLSFNKISGS FSSNVGNFGQ LELLDISYNN FSGAIPEAVD SLVSLRVLKL DHNGFQMSIP RGLLGCQSLV SIDLSSNQLE
201: GSLPDGFGSA FPKLETLSLA GNKIHGRDTD FADMKSISFL NISGNQFDGS VTGVFKETLE VADLSKNRFQ GHISSQVDSN WFSLVYLDLS ENELSGVIKN
301: LTLLKKLKHL NLAWNRFNRG MFPRIEMLSG LEYLNLSNTN LSGHIPREIS KLSDLSTLDV SGNHLAGHIP ILSIKNLVAI DVSRNNLTGE IPMSILEKLP
401: WMERFNFSFN NLTFCSGKFS AETLNRSFFG STNSCPIAAN PALFKRKRSV TGGLKLALAV TLSTMCLLIG ALIFVAFGCR RKTKSGEAKD LSVKEEQSIS
501: GPFSFQTDST TWVADVKQAN AVPVVIFEKP LLNITFSDLL SATSNFDRDT LLADGKFGPV YRGFLPGGIH VAVKVLVHGS TLSDQEAARE LEFLGRIKHP
601: NLVPLTGYCI AGDQRIAIYE YMENGNLQNL LHDLPFGVQT TDDWTTDTWE EETDNGTQNI GTEGPVATWR FRHKIALGTA RALAFLHHGC SPPIIHRDVK
701: ASSVYLDQNW EPRLSDFGLA KVFGNGLDDE IIHGSPGYLP PEFLQPEHEL PTPKSDVYCF GVVLFELMTG KKPIEDDYLD EKDTNLVSWV RSLVRKNQAS
801: KAIDPKIQET GSEEQMEEAL KIGYLCTADL PSKRPSMQQV VGLLKDIEPK SNQ

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Source:UniProtKB/Swiss-Prot;Acc:C0LGK9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.