Factsheet for GSMUA_Achr6P12120_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, nucleus	77.93	66.71
GSMUA_Achr10P...	Banana	cytosol	28.29	29.98
GSMUA_Achr6P23510_001	Banana	nucleus	30.41	29.53
GSMUA_Achr4P00410_001	Banana	mitochondrion	7.64	28.12
GSMUA_Achr7P21200_001	Banana	cytosol	7.07	28.09
GSMUA_Achr7P21120_001	Banana	cytosol	6.93	27.22
Os05t0115800-01	Rice	cytosol, plasma membrane	17.11	25.97
GSMUA_Achr9P19040_001	Banana	nucleus	7.64	19.64
GSMUA_Achr7P16900_001	Banana	cytosol	8.35	19.47
GSMUA_Achr9P31030_001	Banana	cytosol	9.9	7.95
GSMUA_Achr9P16510_001	Banana	cytosol	9.76	7.52
GSMUA_Achr11P...	Banana	cytosol	8.91	7.22
GSMUA_Achr3P08210_001	Banana	nucleus	9.19	7.09

Protein Annotations

MapMan:18.4.23.2.2	Gene3D:3.40.20.10	Gene3D:3.90.190.10	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0004725	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464
GO:GO:0006470	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	GO:GO:0016791	GO:GO:0019538	GO:GO:0035335	GO:GO:0051015	EnsemblPlantsGene:GSMUA_Achr6G12120_001
EnsemblPlants:GSMUA_Achr6P12120_001	EnsemblPlants:GSMUA_Achr6T12120_001	InterPro:Gelsolin-like_dom	InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029006
InterPro:IPR029021	UniProt:M0T6B0	PFAM:PF00626	PFAM:PF00782	ScanProsite:PS00383	PFscan:PS50054
PFscan:PS50056	PANTHER:PTHR10159	PANTHER:PTHR10159:SF491	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	SMART:SM00262
SUPFAM:SSF52799	SUPFAM:SSF55753	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom	InterPro:Tyr_Pase_AS	UniParc:UPI0002953ED5
InterPro:Villin/Gelsolin	SEG:seg	:	:	:	:

Description

Putative Whole genome shotgun sequence of line PN40024, scaffold_185.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr6G12120_001]

Coordinates

chr6:-:8088340..8092565

Molecular Weight (calculated)

77431.3 Da

IEP (calculated)

6.218

GRAVY (calculated)

-0.507

Length

707 amino acids

Sequence
(BLAST)

001: MDGEDHPSSS GTPRKFLLRS ATWTARSNSN SNPNPNPNPN SNRPPKPGRL ALPPPPLLAA WPRPASDDSG HWPATPSTAA APAADDGDGD ISRVDDHVYL
101: GGDAAARDRA ALRRNGITHV LNCAGGACPD HFRGELAYRT LWLRDSPAED LASVLYDAFD FLERARVAPR GRALVHCRRG ASRSAALVVA YIMWRRALPF
201: DDALRTVRAV RPSVDPNLGF AAQLLRCQRR VHALPPTPGS AALRAYRLAP QSPYDPLYLV PKSVDLSATS GTGFLDSRGA FVVHVPTAIY VWLGRDSCPA
301: MAAAAATAAL QVVRYERAEG PITTVHEGSE PAVFWAALTD EPPSPAPEGL LGNRTVELYD LDYDIFRRAA ARARVAPPLP LPWAGAGRRP PVKENGWGRL
401: RRKFAEKGWK EIIKAVVETR SFNNDEPHAT DTIRSPGSFS VESSATPSSS STDSASILST FSPNSSSSSD WYNLSPPRSE LHRMPQTELN SELQPMDSGN
501: VKGKDLRSLA ERRSSDAPSL VLLPSVGDAD ERASPTDFVR DWCPSPPFIS EVEDDQETFD LERRLSLGAS DQGDAAEDEA SCADDHNQAI HPVLFRWPDM
601: EKVEDVHPGL LDTESVFLLL ASESKSGSRK PRTKKIYVWL GRNSGKDISG VKEEHELMYL DRVSTEFFNH MGIPVDTPVQ IIREGQEPEQ FLNHLFSFHQ
701: ATERHPS

Best Arabidopsis Sequence Match ( AT3G23610.4 )
(BLAST)

001: MSSRDRGSPS SSSSSSSLPG IEKYNEKVKN QIQALVRVIK VARTYRDDNV PSLIEQGLYL GSVAAASNKN VLKSYNVTHI LTVASSLRPA HPDDFVYKVV
101: RVVDKEDTNL EMYFDECVDF IDEAKRQGGS VLVHCFVGKS RSVTIVVAYL MKKHGMTLAQ ALQHVKSKRP VASPNAGFIR QLQDLEKSMQ GMPYYNILRS
201: RLLG

Arabidopsis Description

DSPTP1dual specificity protein phosphatase 1 [Source:TAIR;Acc:AT3G23610]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.