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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, cytosol

Predictor Summary:
  • nucleus 2
  • plastid 1
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
YLoc:cytosol
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G100930.1 Barley mitochondrion 20.17 78.99
OQU77254 Sorghum cytosol 82.4 50.33
TraesCS1D01G046000.2 Wheat cytosol 80.69 50.07
TraesCS1B01G058600.2 Wheat cytosol 80.04 49.67
TraesCS1A01G045300.2 Wheat nucleus 80.04 49.6
Zm00001d035599_P001 Maize cytosol 76.61 47.66
Zm00001d035600_P001 Maize mitochondrion 76.39 47.28
Zm00001d011037_P001 Maize cytosol, plastid 77.68 46.71
GSMUA_Achr6P23510_001 Banana nucleus 48.71 31.18
GSMUA_Achr10P... Banana cytosol 42.27 29.54
PGSC0003DMT400060202 Potato cytosol 42.27 22.29
Solyc05g054700.2.1 Tomato cytosol 41.63 21.92
CDY02924 Canola cytosol 33.26 21.71
KRH01585 Soybean nucleus 39.27 21.53
Bra014764.1-P Field mustard cytosol 32.62 21.38
VIT_13s0019g00070.t01 Wine grape cytosol 41.2 21.33
CDX76111 Canola cytosol 32.4 21.27
KRH70517 Soybean nucleus 38.2 21.24
KRG97518 Soybean nucleus 27.47 20.95
KRH31354 Soybean nucleus, plastid 29.61 20.78
VIT_01s0137g00600.t01 Wine grape cytosol 35.41 19.69
KRH43105 Soybean cytosol 26.82 19.11
KRH59249 Soybean cytosol 26.61 18.79
Solyc05g013750.2.1 Tomato nucleus 34.55 18.44
PGSC0003DMT400030617 Potato nucleus 34.55 18.42
VIT_07s0185g00130.t01 Wine grape cytosol 29.4 17.86
GSMUA_Achr6P12120_001 Banana cytosol 25.97 17.11
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, nucleus 27.47 15.5
Os02t0720300-01 Rice nucleus 2.36 4.1
Os06t0308100-01 Rice cytosol 2.15 3.58
Os01t0347000-01 Rice plasma membrane 3.22 1.72
Os01t0311500-01 Rice nucleus 2.79 1.4
Os01t0390900-01 Rice plasma membrane 0.21 0.5
Protein Annotations
Gene3D:3.40.20.10MapMan:35.1InterPro:ADF-H/Gelsolin-like_dom_sfProteinID:BAF16381.1ProteinID:BAS91966.1InterPro:DUSP
GO:GO:0003674GO:GO:0003824GO:GO:0004725GO:GO:0006464GO:GO:0006470GO:GO:0008138
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016311
GO:GO:0016740GO:GO:0016787GO:GO:0016791GO:GO:0019538GO:GO:0035335InterPro:IPR029006
EnsemblPlantsGene:Os05g0115800EnsemblPlants:Os05t0115800-01PANTHER:PTHR10159PANTHER:PTHR10159:SF491UniProt:Q0DL92SUPFAM:SSF55753
UniParc:UPI0000E12307SEG:seg::::
Description
MITOGEN-ACTIVATED PROTEIN KINASE PHOSPHATASE 1Similar to MAP kinase phosphatase (Fragment). (Os05t0115800-01);Similar to MAP kinase phosphatase. (Os05t0115800-02)
Coordinates
chr5:-:858432..861595
Molecular Weight (calculated)
50977.7 Da
IEP (calculated)
7.625
GRAVY (calculated)
-0.451
Length
466 amino acids
Sequence
(BLAST)
001: RMAPHSPYAP LHLVPKMLNE PSPAALDSRG AFIVHVLSSI YVWVGMKCDQ VMEKDARAAA FQVVRYEKVQ GHIKVVREGS EVPEFWDAFS SAPVNSDSNT
101: KISKDQIDSA SKTGPGNRRV ESYDADFELV YKAITGGVVP AFSSSGAGDE THLPARESTW SSLRRKFISR SLARVYSDSA LIRDLDPRVD RVQHLAAEAS
201: TSPPFLSPSS LSSDSSISSK YSSDSPSLSP STSSPTSLGL SPASSNFSHT LVPSSRSPLH QSSNEEPSKS GLGSIRSPSK TSSIAERRGG FSSLKLPSFQ
301: KDLVLPPRVP TSLRREEEVT DKSNNNSVKQ LTGVCCPEKC TGNTSTVHTK TGITERTDSI SEACGNLQLL VYRWPSKEKL TTFTRKDLDP KSVLIFVTPE
401: DSRSEAVKTV HIWVGGEYES SKCVDTVDWQ QVVGDFFHLK ELGNTLPVKV FKEHETENLL EVLNAR
Best Arabidopsis Sequence Match ( AT5G57320.1 )
(BLAST)
001: MTFSMRDLDQ ALQGAGQKSG IEIWRIENFK PVTVPQESHG KFFTGDSYIV LKTTASRSGS LHHDIHYWLG KDSSQDEAGA VAVMTVELDS ALGGRAVQYR
101: EVQGHETEKF LSYFKPCIIP QEGGVASGFN HVKPEEHQTR LYICKGKHVV RVKEVPFVRS TLNHEDVFIL DTESKIFQFS GSKSSIQERA KALEVVQYIK
201: DTYHDGKCDI AAVEDGRMMA DAEAGEFWGL FGGFAPLPKK PAVNDDETAA SDGIKLFSVE KGQTDAVEAE CLTKELLDTN KCYILDCGLE LFVWKGRSTS
301: IDQRKSATEA AEEFFRSSEP PKSNLVSVME GYETVMFRSK FDSWPASSTI AEPQQGRGKV AALLQRQGVN VQGLVKTSSS SSKDEPKPYI DGTGNLQVWR
401: INCEEKILLE AAEQSKFYSG DCYILQYSYP GEDREEHLVG TWFGKQSVEE DRASAISLAN KMVESMKFVP AQARINEGKE PIQFFVIMQS FITFKGGVSD
501: AFKKYIAEND IPDTTYEAEG VALFRVQGSG PENMQAIQIE AASAGLNSSH CYILHGDSTV FTWCGNLTSS EDQELMERML DLIKPNEPTK AQKEGSESEQ
601: FWELLGGKSE YPSQKIKRDG ESDPHLFSCT YTNESLKATE IFNFTQDDLM TEDIFILDCH TEVFVWVGQQ VDPKKKPQAL DIGENFLKHD FLLENLASET
701: PIYIVTEGNE PPFFTRFFTW DSSKSGMHGD SFQRKLAILT NKGKPLLDKP KRRVPAYSSR STVPDKSQPR SRSMTFSPDR ARVRGRSPAF NALAANFEKL
801: NIRNQSTPPP MVSPMVRKLY PKSHAPDLSK IAPKSAIAAR TALFEKPTPT SQEPPTSPSS SEATNQAEAP KSTSETNEEE AMSSINEDSK EEEAEEESSL
901: PTFPYERLKT DSEDPVSDVD LTRREAYLTS VEFKEKFEMT KNEFYKLPKW KQNKLKMSVN LF
Arabidopsis Description
VLN5Villin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVC6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.