Factsheet for VIT_13s0019g00070.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70517	Soybean	nucleus	57.89	62.17
KRH01585	Soybean	nucleus	56.33	59.65
CDY02924	Canola	cytosol	47.0	59.24
Bra014764.1-P	Field mustard	cytosol	46.78	59.21
CDX76111	Canola	cytosol	46.56	59.01
PGSC0003DMT400060202	Potato	cytosol	57.56	58.6
Solyc05g054700.2.1	Tomato	cytosol	57.44	58.42
GSMUA_Achr10P...	Banana	cytosol	41.22	55.62
GSMUA_Achr6P23510_001	Banana	nucleus	43.56	53.85
Zm00001d035599_P001	Maize	cytosol	44.78	53.81
TraesCS1D01G046000.2	Wheat	cytosol	44.44	53.26
TraesCS1A01G045300.2	Wheat	nucleus	44.44	53.19
TraesCS1B01G058600.2	Wheat	cytosol	44.33	53.13
OQU77254	Sorghum	cytosol	45.0	53.08
Zm00001d011037_P001	Maize	cytosol, plastid	43.67	50.71
Zm00001d035600_P001	Maize	mitochondrion	40.89	48.87
HORVU1Hr1G008230.4	Barley	plastid	44.0	45.26
VIT_07s0185g00130.t01	Wine grape	cytosol	38.11	44.72
VIT_01s0137g00600.t01	Wine grape	cytosol	41.44	44.51
Os05t0115800-01	Rice	cytosol, plasma membrane	21.33	41.2
VIT_05s0020g02710.t01	Wine grape	cytosol	5.56	28.9
VIT_12s0059g01650.t01	Wine grape	nucleus	6.78	22.43
VIT_17s0000g00360.t01	Wine grape	cytosol	11.11	10.74

Protein Annotations

EntrezGene:100260475	wikigene:100260475	MapMan:18.4.23.2.2	Gene3D:3.40.20.10	Gene3D:3.90.190.10	InterPro:ADF-H/Gelsolin-like_dom_sf
ProteinID:CCB56389	ProteinID:CCB56389.1	InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	UniProt:F6HNA1	EMBL:FN595998
GO:GO:0003674	GO:GO:0003824	GO:GO:0004725	GO:GO:0006464	GO:GO:0006470	GO:GO:0008138
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791
GO:GO:0019538	GO:GO:0035335	InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029006	InterPro:IPR029021
EntrezGene:LOC100260475	wikigene:LOC100260475	PFAM:PF00782	ScanProsite:PS00383	PFscan:PS50054	PFscan:PS50056
PANTHER:PTHR10159	PANTHER:PTHR10159:SF491	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	SUPFAM:SSF52799	SUPFAM:SSF55753
InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom	InterPro:Tyr_Pase_AS	UniParc:UPI0002107FEE	ArrayExpress:VIT_13s0019g00070	EnsemblPlantsGene:VIT_13s0019g00070
EnsemblPlants:VIT_13s0019g00070.t01	RefSeq:XP_002276242	RefSeq:XP_002276242.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr13:+:2279402..2286101

Molecular Weight (calculated)

99222.2 Da

IEP (calculated)

6.553

GRAVY (calculated)

-0.406

Length

900 amino acids

Sequence
(BLAST)

001: MVGKEDGSRV PYQVAGNRKT FWRSASWSSS RTGLRNPESE EKDCSDPNGG IGNNSGQNRR FPAPLTPRSQ QNCKARACLP PLQPLSIARR SLDEWPKASS
101: DDVGEWPQPP TPSGRDMNKG GDRLKLDLSA IQKNPDKNGG LVRRDKIAFF DKECSKVAEH IYLGGDAVAK DREILKQNRI THILNCVGFV CPEYFRADFV
201: YRTLWLQDSP SEDITSILYD VFDYFEDVRE QGGRVFVHCC QGVSRSTSLV IAYLMWREGQ SFEDAFQYVK AARGIADPNM GFACQLLQCQ KRVHAFPLSP
301: SSLLRMYRIA PHSPYDPLHL VPKMLNDPSP SALDSRGAFI VHVPSAIYVW IGKNCEFIME RDARAAVCQI VRYERVQGPI TVIKEGEEQS YFWDAFSNLL
401: PLMDKSVNGV EVGKSMVDVC LGERKVDSYN VDYEIFKKAI SGGFVPPFAS SETEHETHLP VRESSWSALR RKFAFGNMKE FISAPRLSFH RVFSDSMLIV
501: GVDNFMNKPS HSPANSSTSS SPPPSSSSSA SSSSSSSSSS SSPPYLSPDS ISSDSSGTSK YFSESPLMSP STVACPLPLS STLSTLSNLS LFTSSTSNTS
601: SQSASNASFQ SVSNNPELVS VTSQHSSQSV SLPFKRFPVS LAERRGSLSK SLTLPVLTDE TRLKNNVSTS VSCQEDAVRI DVNTCSFSEP CSSVEHVSEF
701: KNGARNGDGN STEQCELRIS SGRVASDDSH KDIGFVRNGD ETLRNDPLEG SQDSTVLTGM MEAHGDPVQP LVCCWPSLEK FASFGAGDLD SKAAFVFFFP
801: STGLGKAEDR IIYIWVGRSF NHGNTRALLD SSREVGDLEE IDWNQVGCDV RSQLGLPEDT AIKNLVRHQK DLPLTKSVRR CCFISSLWQF NWLYSAVTTS

Best Arabidopsis Sequence Match ( AT3G23610.4 )
(BLAST)

001: MSSRDRGSPS SSSSSSSLPG IEKYNEKVKN QIQALVRVIK VARTYRDDNV PSLIEQGLYL GSVAAASNKN VLKSYNVTHI LTVASSLRPA HPDDFVYKVV
101: RVVDKEDTNL EMYFDECVDF IDEAKRQGGS VLVHCFVGKS RSVTIVVAYL MKKHGMTLAQ ALQHVKSKRP VASPNAGFIR QLQDLEKSMQ GMPYYNILRS
201: RLLG

Arabidopsis Description

DSPTP1dual specificity protein phosphatase 1 [Source:TAIR;Acc:AT3G23610]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.