CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014764.1-P	Field mustard	cytosol	93.7	94.09
CDX76111	Canola	cytosol	93.56	94.08
KRH70517	Soybean	nucleus	57.14	48.69
GSMUA_Achr10P...	Banana	cytosol	45.1	48.28
KRH01585	Soybean	nucleus	57.14	48.0
Zm00001d035599_P001	Maize	cytosol	49.72	47.4
TraesCS1B01G058600.2	Wheat	cytosol	49.44	47.0
VIT_13s0019g00070.t01	Wine grape	cytosol	59.24	47.0
OQU77254	Sorghum	cytosol	50.14	46.92
TraesCS1A01G045300.2	Wheat	nucleus	49.3	46.81
TraesCS1D01G046000.2	Wheat	cytosol	49.16	46.74
PGSC0003DMT400060202	Potato	cytosol	56.44	45.59
GSMUA_Achr6P23510_001	Banana	nucleus	46.36	45.47
Zm00001d011037_P001	Maize	cytosol, plastid	49.16	45.29
Solyc05g054700.2.1	Tomato	cytosol	55.88	45.08
Zm00001d035600_P001	Maize	mitochondrion	45.8	43.43
HORVU1Hr1G008230.4	Barley	plastid	49.3	40.23
Os05t0115800-01	Rice	cytosol, plasma membrane	21.71	33.26
CDX77494	Canola	cytosol	7.14	28.18
CDX85116	Canola	cytosol	7.14	28.18
CDY18107	Canola	cytosol	7.42	27.32
CDY05232	Canola	cytosol	7.56	27.14
CDY24718	Canola	cytosol	7.14	25.63
CDY50461	Canola	plastid	7.14	22.47
CDY15058	Canola	nucleus	7.28	21.4
CDX93055	Canola	nucleus	7.14	20.99
CDY27864	Canola	nucleus	6.86	20.16
CDY00870	Canola	nucleus	6.72	19.75
CDX80384	Canola	nucleus	11.76	9.58
CDX88046	Canola	nucleus	11.48	9.4

Protein Annotations

MapMan:18.4.23.2.2	Gene3D:3.40.20.10	Gene3D:3.90.190.10	GO:A0A078EQJ0	InterPro:ADF-H/Gelsolin-like_dom_sf	EnsemblPlants:CDY02924
ProteinID:CDY02924	ProteinID:CDY02924.1	InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004725	GO:GO:0006464	GO:GO:0006470	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00115187001
InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029006	InterPro:IPR029021	PFAM:PF00782	ScanProsite:PS00383
PFscan:PS50054	PFscan:PS50056	PANTHER:PTHR10159	PANTHER:PTHR10159:SF491	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195
SUPFAM:SSF52799	SUPFAM:SSF55753	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom	InterPro:Tyr_Pase_AS	UniParc:UPI0004EDAD90
SEG:seg	:	:	:	:	:

Description

BnaC04g25620D

Coordinates

chrLK031938:-:530295..533255

Molecular Weight (calculated)

78928.5 Da

IEP (calculated)

6.621

GRAVY (calculated)

-0.391

Length

714 amino acids

Sequence
(BLAST)

001: MVGREDTMGN EEPPPPPGSK RMFWRSASWS ASRTASSQAP EEDPHLTIPS GQQSRSRCGG APPLTPRSHH NKARACLPPL QPLSISRRSL DEWPKAGSDD
101: VGEWPHPPTT PSGSGMNERL KLDLSSTRVP DKSSGLVKRE KIACFDKECS KVADHIYVGG DAVAKDKDIL KSNRITHILN CVGFICPEYF KSDFCYRSLW
201: LRDSPSEDIT SILYDVFDYF EDVREQKGRI FVHCCQGVSR STSLVIAYLM WREGQSFDDA FHYVKSARGI ADPNMGFACQ LLQCQKRVHA FPLSPTSLLR
301: MYKMSPHSPY DPLHLVPKLL NDPRPSSLDS RGAFILQLPS AIYIWVGRRC EGIMERDAKA AVCQIARYEK VEAPITVVRE GEEPGYYWDA FASILPVIAD
401: GSTCKTTQTG ERRVEAYNLD FEIFKKAIEG GFVPTLASSN NEHETHLPAR ENSWSSLKCK FASRFERGFR YVSKTPLSRV YSDSMMIVHA LGSPSSSTTT
501: ASSDSVCAAN PSNSRKSFLP PLILPKFASL SLLPSQTSTE PGPSRKASPS LAERRGGLKG SLKLPGLADD SSDIVFNLEG VRKDDPNLPQ KEMDESGSGQ
601: ALACRWPSME MITEVSRGYL DSESVIALVL PSGDDDVGGT SSRILYIWIG KSFAVDNNCY LLDSNKAVDS VENLDWVQIG EAILSKMDLP KDTPVKIVRE
701: AEDQTEFLAL LSAL

Best Arabidopsis Sequence Match ( AT3G06110.2 )
(BLAST)

001: MEKVVDLFGV GEANSQKLLE GGKDLSEIQQ GLFIGSVAEA NNKDFLKSSN ITHVLTVAVA LAPPYPDDFV YKVIEVVDRS ETDLTVYFDE CYSFIDQAIQ
101: SGGGVLVHCF MGMSRSVTIV VAYLMKKHGM GFSKAMELVR SRRHQAYPNP GFISQLQQFE KSIQGNA

Arabidopsis Description

DSPTP1BDual specificity protein phosphatase 1B [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.