CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18107	Canola	cytosol	73.13	85.57
CDX77494	Canola	cytosol	66.52	83.43
CDX85116	Canola	cytosol	66.52	83.43
AT3G23610.3	Thale cress	cytosol, plastid	67.84	67.54
KRH51034	Soybean	cytosol	44.05	59.17
VIT_05s0020g02710.t01	Wine grape	cytosol	44.05	57.8
KRH02116	Soybean	cytosol	44.49	55.49
GSMUA_Achr7P21200_001	Banana	cytosol	43.17	55.06
GSMUA_Achr7P21120_001	Banana	cytosol	42.29	53.33
Solyc01g080040.2.1	Tomato	cytosol	40.53	51.4
GSMUA_Achr4P00410_001	Banana	mitochondrion	42.29	50.0
TraesCS3D01G157700.3	Wheat	cytosol	40.09	46.19
TraesCS3A01G149800.1	Wheat	cytosol	39.65	45.69
TraesCS3B01G176900.1	Wheat	cytosol	39.65	45.69
EER93666	Sorghum	cytosol	37.89	45.03
Os01t0390900-01	Rice	plasma membrane	39.21	44.72
CDY24718	Canola	cytosol	38.77	44.22
CDY05232	Canola	cytosol	37.89	43.22
HORVU3Hr1G030420.6	Barley	cytosol, peroxisome	39.65	42.65
Zm00001d033371_P003	Maize	cytosol	29.07	31.28
CDY27864	Canola	nucleus	20.26	18.93
CDY00870	Canola	nucleus	20.26	18.93
CDY15058	Canola	nucleus	19.38	18.11
CDX93055	Canola	nucleus	18.94	17.7
CDX76111	Canola	cytosol	22.47	7.18
CDY02924	Canola	cytosol	22.47	7.14
CDX88046	Canola	nucleus	26.43	6.88
CDX80384	Canola	nucleus	25.99	6.73

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.23.2.2	Gene3D:3.90.190.10	GO:A0A078IKD1	UniProt:A0A078IKD1
InterPro:Atypical_DUSP	InterPro:Atypical_DUSP_famB	EnsemblPlants:CDY50461	ProteinID:CDY50461	ProteinID:CDY50461.1	InterPro:DUSP
InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0000188	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006470
GO:GO:0007154	GO:GO:0007165	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0017017	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00096758001
InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029021	PFAM:PF00782	PRINTS:PR01908	PRINTS:PR01910
PFscan:PS50054	PFscan:PS50056	PANTHER:PTHR10159	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	SUPFAM:SSF52799
InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom	UniParc:UPI0004EF1627	SEG:seg	:	:

Description

BnaCnng19400DBnaCnng19400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IKD1]

Coordinates

chrLK032913:-:67158..68720

Molecular Weight (calculated)

25269.6 Da

IEP (calculated)

8.888

GRAVY (calculated)

-0.104

Length

227 amino acids

Sequence
(BLAST)

001: MQLQTSPLVI SQSPFFSDLF SSPLWLIHPP LLSTMSSRDK GSSSSPAMDK ETYVKNRIQE LVRLIKVARV YRQDNVPSLI QEGLYLGSFA AASNKNVLKS
101: CNVTHILTVA SSLRPAHPGD FVYKVVPVVD KEDTNLEIYF DECIDFIDEA KKQGGSVLVH CFVGKSRSVT VIVAYLMKKH GMTLTQALQH VQSIRPVANP
201: NTGFIRQLQD LEKSLQGKQE PLAHCQV

Best Arabidopsis Sequence Match ( AT3G23610.2 )
(BLAST)

001: MSSRDRGSPS SSSSSSSLPG IEKYNEKVKN QIQALVRVIK VARTYRDDNV PSLIEQGLYL GSVAAASNKN VLKSYNVTHI LTVASSLRPA HPDDFVYKVV
101: RVVDKEDTNL EMYFDECVDF IDEAKRQGGS VLVHCFVGKS RSVTIVVAYL MKKHGMTLAQ ALQHVKSKRP VASPNAGFIR QLQDLEKSMQ GKQVTIAQCQ
201: A

Arabidopsis Description

DSPTP1dual specificity protein phosphatase 1 [Source:TAIR;Acc:AT3G23610]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.