CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24718	Canola	cytosol	95.98	95.98
AT3G06110.2	Thale cress	cytosol	72.36	86.23
VIT_05s0020g02710.t01	Wine grape	cytosol	43.22	49.71
CDX77494	Canola	cytosol	44.72	49.17
CDX85116	Canola	cytosol	44.72	49.17
GSMUA_Achr7P21200_001	Banana	cytosol	43.72	48.88
KRH51034	Soybean	cytosol	39.7	46.75
KRH02116	Soybean	cytosol	41.71	45.6
GSMUA_Achr7P21120_001	Banana	cytosol	41.21	45.56
CDY18107	Canola	cytosol	42.71	43.81
Solyc01g080040.2.1	Tomato	cytosol	39.2	43.58
GSMUA_Achr4P00410_001	Banana	mitochondrion	41.21	42.71
EER93666	Sorghum	cytosol	40.7	42.41
Os01t0390900-01	Rice	plasma membrane	42.21	42.21
TraesCS3A01G149800.1	Wheat	cytosol	40.2	40.61
TraesCS3B01G176900.1	Wheat	cytosol	40.2	40.61
TraesCS3D01G157700.3	Wheat	cytosol	39.7	40.1
HORVU3Hr1G030420.6	Barley	cytosol, peroxisome	40.7	38.39
CDY50461	Canola	plastid	43.22	37.89
Zm00001d033371_P003	Maize	cytosol	32.16	30.33
CDY27864	Canola	nucleus	22.61	18.52
CDY00870	Canola	nucleus	22.61	18.52
CDX93055	Canola	nucleus	22.61	18.52
CDY15058	Canola	nucleus	22.11	18.11
CDX76111	Canola	cytosol	27.14	7.61
CDY02924	Canola	cytosol	27.14	7.56
CDX88046	Canola	nucleus	23.62	5.39
CDX80384	Canola	nucleus	23.12	5.25

Protein Annotations

MapMan:18.4.23.2.2	Gene3D:3.90.190.10	GO:A0A078EW96	EnsemblPlants:CDY05232	ProteinID:CDY05232	ProteinID:CDY05232.1
InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006470
GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787
GO:GO:0016791	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00120046001	InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029021
PFAM:PF00782	PFscan:PS50054	PFscan:PS50056	PANTHER:PTHR10159	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195
SMART:SM00404	SUPFAM:SSF52799	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom	InterPro:Tyr_Pase_cat	UniParc:UPI0004EE2855

Description

BnaC05g45710D

Coordinates

chrLK031960:+:473932..475374

Molecular Weight (calculated)

21952.3 Da

IEP (calculated)

4.875

GRAVY (calculated)

-0.032

Length

199 amino acids

Sequence
(BLAST)

001: MHQPGIEPGS VPWQVELEKM EKVVDLFGVG EANTQKLLEG GNDLSQIQQG LFIGSVAEAN NKDLLKSSNV THVLTIAVAL SPPYPDDFIY KVLEVVDRSE
101: TDLTVYFDQC YSFIDQAIES GGGVLVHCFM GVSRSVTIVV AYLMRKHGIG FSKAMELVKS RRPQAMPNFG FVSQLQQFEK SIKVHDEASS SVDNKEIVV

Best Arabidopsis Sequence Match ( AT3G06110.3 )
(BLAST)

001: MEKVVDLFGV GEANSQKLLE GGKDLSEIQQ GLFIGSVAEA NNKDFLKSSN ITHVLTVAVA LAPPYPDDFV YKVIEVVDRS ETDLTVYFDE CYSFIDQAIQ
101: SGGGVLVHCF MGMSRSVTIV VAYLMKKHGM GFSKAMELVR SRRHQAYPNP GFISQLQQFE KSIQGNA

Arabidopsis Description

DSPTP1BDual specificity protein phosphatase 1B [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.