Factsheet for VIT_05s0020g02710.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51034	Soybean	cytosol	58.96	60.35
GSMUA_Achr7P21200_001	Banana	cytosol	61.27	59.55
Bra014966.1-P	Field mustard	cytosol	61.85	59.12
CDX77494	Canola	cytosol	61.85	59.12
CDX85116	Canola	cytosol	61.85	59.12
GSMUA_Achr7P21120_001	Banana	cytosol	61.27	58.89
KRH02116	Soybean	cytosol	61.27	58.24
GSMUA_Achr4P00410_001	Banana	mitochondrion	60.69	54.69
AT3G06110.2	Thale cress	cytosol	51.45	53.29
Solyc01g080040.2.1	Tomato	cytosol	54.91	53.07
CDY18107	Canola	cytosol	57.8	51.55
EER93666	Sorghum	cytosol	56.65	51.31
TraesCS3A01G149800.1	Wheat	cytosol	57.8	50.76
TraesCS3B01G176900.1	Wheat	cytosol	57.8	50.76
Os01t0390900-01	Rice	plasma membrane	58.38	50.75
TraesCS3D01G157700.3	Wheat	cytosol	57.23	50.25
Bra020776.1-P	Field mustard	cytosol	50.29	48.33
HORVU3Hr1G030420.6	Barley	cytosol, peroxisome	57.23	46.92
AT3G23610.3	Thale cress	cytosol, plastid	61.27	46.49
CDY50461	Canola	plastid	57.8	44.05
CDY24718	Canola	cytosol	50.29	43.72
CDY05232	Canola	cytosol	49.71	43.22
Bra028323.1-P	Field mustard	cytosol, mitochondrion	57.23	39.76
Zm00001d033371_P003	Maize	cytosol	42.2	34.6
VIT_12s0059g01650.t01	Wine grape	nucleus	27.75	17.65
VIT_17s0000g00360.t01	Wine grape	cytosol	36.99	6.87
VIT_07s0185g00130.t01	Wine grape	cytosol	29.48	6.65
VIT_01s0137g00600.t01	Wine grape	cytosol	29.48	6.09
VIT_13s0019g00070.t01	Wine grape	cytosol	28.9	5.56

Protein Annotations

EntrezGene:100264956	wikigene:100264956	MapMan:18.4.23.2.2	Gene3D:3.90.190.10	ProteinID:CBI26187	ProteinID:CBI26187.3
UniProt:D7T6R6	InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	EMBL:FN595749	GO:GO:0003674	GO:GO:0003824
GO:GO:0006464	GO:GO:0006470	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0019538	InterPro:IPR000387	InterPro:IPR020422
InterPro:IPR029021	EntrezGene:LOC100264956	wikigene:LOC100264956	PFAM:PF00782	PFscan:PS50054	PFscan:PS50056
PANTHER:PTHR10159	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	SUPFAM:SSF52799	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom
UniParc:UPI00019831A0	ArrayExpress:VIT_05s0020g02710	EnsemblPlantsGene:VIT_05s0020g02710	EnsemblPlants:VIT_05s0020g02710.t01	unigene:Vvi.22982	RefSeq:XP_002280487
RefSeq:XP_002280487.1	RefSeq:XP_010649864.1	RefSeq:XP_010649865.1	RefSeq:XP_019075257.1	:	:

Description

No Description!

Coordinates

chr5:-:4446732..4450378

Molecular Weight (calculated)

19654.8 Da

IEP (calculated)

8.347

GRAVY (calculated)

-0.247

Length

173 amino acids

Sequence
(BLAST)

001: MDRIDERFRE QVAAIQRVML LTRCFKVDNV PCQIDEGLFL GSVGAASNKS ELKSLNITHI LTVANTLDPA HPNDFTYKVI EVTDKADTNI AQHFDECFNF
101: IDEAKRLGGG VLVHCFLGRS RSVTIVIAYM MKKHGMSLSQ ALEHVKSRRQ HAAPNYGFML QLQNFEKSLR EQR

Best Arabidopsis Sequence Match ( AT3G23610.2 )
(BLAST)

001: MSSRDRGSPS SSSSSSSLPG IEKYNEKVKN QIQALVRVIK VARTYRDDNV PSLIEQGLYL GSVAAASNKN VLKSYNVTHI LTVASSLRPA HPDDFVYKVV
101: RVVDKEDTNL EMYFDECVDF IDEAKRQGGS VLVHCFVGKS RSVTIVVAYL MKKHGMTLAQ ALQHVKSKRP VASPNAGFIR QLQDLEKSMQ GKQVTIAQCQ
201: A

Arabidopsis Description

DSPTP1dual specificity protein phosphatase 1 [Source:TAIR;Acc:AT3G23610]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.