Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93055 | Canola | nucleus | 98.35 | 98.35 |
| Bra013201.1-P | Field mustard | nucleus | 81.89 | 97.55 |
| CDY00870 | Canola | nucleus | 87.24 | 87.24 |
| CDY27864 | Canola | nucleus | 86.83 | 86.83 |
| AT2G04550.1 | Thale cress | nucleus | 85.19 | 80.54 |
| PGSC0003DMT400036094 | Potato | nucleus | 67.9 | 60.66 |
| Solyc12g005990.1.1 | Tomato | nucleus | 66.26 | 59.41 |
| Solyc07g049410.2.1 | Tomato | nucleus | 64.2 | 59.09 |
| PGSC0003DMT400001770 | Potato | nucleus | 62.96 | 58.62 |
| KRH73311 | Soybean | cytosol | 65.02 | 58.3 |
| KRH14828 | Soybean | cytosol | 64.2 | 57.56 |
| VIT_12s0059g01650.t01 | Wine grape | nucleus | 63.79 | 56.99 |
| TraesCS7B01G129500.1 | Wheat | cytosol | 62.14 | 56.98 |
| TraesCS7D01G224700.1 | Wheat | cytosol | 61.73 | 56.6 |
| TraesCS7A01G223000.1 | Wheat | cytosol | 61.73 | 56.6 |
| Zm00001d037412_P001 | Maize | nucleus | 62.14 | 54.91 |
| Os06t0308100-01 | Rice | cytosol | 62.96 | 54.84 |
| EER89672 | Sorghum | nucleus | 61.32 | 54.58 |
| Os02t0720300-01 | Rice | nucleus | 55.97 | 50.75 |
| HORVU7Hr1G045710.4 | Barley | cytosol | 61.73 | 50.34 |
| GSMUA_Achr9P19040_001 | Banana | nucleus | 56.79 | 50.18 |
| TraesCS6D01G263500.1 | Wheat | cytosol | 55.97 | 49.63 |
| TraesCS6A01G283000.1 | Wheat | cytosol | 55.56 | 49.27 |
| EES07355 | Sorghum | nucleus | 53.91 | 48.7 |
| GSMUA_Achr7P16900_001 | Banana | cytosol | 59.67 | 47.85 |
| Zm00001d017863_P001 | Maize | cytosol | 52.67 | 42.24 |
| HORVU6Hr1G071120.1 | Barley | plastid | 55.14 | 42.14 |
| CDX77494 | Canola | cytosol | 18.52 | 24.86 |
| CDX85116 | Canola | cytosol | 18.52 | 24.86 |
| CDY18107 | Canola | cytosol | 18.52 | 23.2 |
| CDY05232 | Canola | cytosol | 18.11 | 22.11 |
| CDY24718 | Canola | cytosol | 17.7 | 21.61 |
| CDY50461 | Canola | plastid | 18.11 | 19.38 |
| CDX76111 | Canola | cytosol | 22.22 | 7.61 |
| CDY02924 | Canola | cytosol | 21.4 | 7.28 |
| CDX88046 | Canola | nucleus | 19.75 | 5.5 |
| CDX80384 | Canola | nucleus | 19.75 | 5.47 |
Protein Annotations
| MapMan:18.4.23.2.2 | Gene3D:3.90.190.10 | GO:A0A078FS11 | UniProt:A0A078FS11 | EnsemblPlants:CDY15058 | ProteinID:CDY15058 |
| ProteinID:CDY15058.1 | InterPro:DUSP | InterPro:Dual-sp_phosphatase_cat-dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004725 |
| GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008138 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016311 | GO:GO:0016787 | GO:GO:0016791 | GO:GO:0019538 | GO:GO:0035335 | EnsemblPlantsGene:GSBRNA2T00085173001 |
| InterPro:IPR000387 | InterPro:IPR020422 | InterPro:IPR029021 | PFAM:PF00782 | ScanProsite:PS00383 | PFscan:PS50054 |
| PFscan:PS50056 | PANTHER:PTHR10159 | PANTHER:PTHR10159:SF329 | InterPro:Prot-tyrosine_phosphatase-like | SMART:SM00195 | SUPFAM:SSF52799 |
| InterPro:TYR_PHOSPHATASE_DUAL_dom | InterPro:TYR_PHOSPHATASE_dom | InterPro:Tyr_Pase_AS | UniParc:UPI0004EE15C5 | SEG:seg | : |
Description
BnaC03g44190DBnaC03g44190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FS11]
Coordinates
chrLK032051:-:197616..199568
Molecular Weight (calculated)
26936.1 Da
IEP (calculated)
7.137
GRAVY (calculated)
-0.328
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKRERENPC SLCGHFHKYE EGEVCGICGH RMPDPSDVPA PHVHVSAFPS EILPEFLFLG SYDNASRSEL LKTQGISRIL NTVPMCQNLY RNSFTYHGLS
101: DEKVLQFDDA IKFLDQCEKD KARVLVHCMS GKSRSPAVVI AYLMKRKGWR LAEKFYQQLE AFEQAVFGSR EGMMSAMSLN DPPTFGFGFP KVNNVQAQVP
201: VFNSAPASSI FSSPASSIPP QGFTFGAAPP KPTTGDDITM EGS
101: DEKVLQFDDA IKFLDQCEKD KARVLVHCMS GKSRSPAVVI AYLMKRKGWR LAEKFYQQLE AFEQAVFGSR EGMMSAMSLN DPPTFGFGFP KVNNVQAQVP
201: VFNSAPASSI FSSPASSIPP QGFTFGAAPP KPTTGDDITM EGS
001: MRKRERENPC SICGHYHKYE EGEVCGVCGH CMPVSSDTVA PQQVHVSAFP SEILPEFLYL GSYDNASRSE LLKTQGISRV LNTVPMCQNL YRNSFTYHGL
101: DNEKVLQFDD AIKFLDQCEK DKARVLVHCM SGKSRSPAVV VAYLMKRKGW RLAESHQWVK QRRPSTDISP EFYQQLQEFE QGIFGSEMMS AMNINDAPTF
201: GFGFPKIDNQ AQAPVFNNAP TSSIFSSPAS SIPPQEFTFG ATPPKPTTGG DIAMDGS
101: DNEKVLQFDD AIKFLDQCEK DKARVLVHCM SGKSRSPAVV VAYLMKRKGW RLAESHQWVK QRRPSTDISP EFYQQLQEFE QGIFGSEMMS AMNINDAPTF
201: GFGFPKIDNQ AQAPVFNNAP TSSIFSSPAS SIPPQEFTFG ATPPKPTTGG DIAMDGS
Arabidopsis Description
IBR5Protein-tyrosine-phosphatase IBR5 [Source:UniProtKB/Swiss-Prot;Acc:Q84JU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.