Factsheet for Bra013201.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003735.1-P
Bra008231.1-P
Bra015801.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G04550.1	Bra003735.1-P	AT1G75950.1	12795696
AT2G04550.1	Bra008231.1-P	AT1G75950.1	12795696
AT2G04550.1	Bra015801.1-P	AT1G75950.1	12795696

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93055	Canola	nucleus	99.51	83.54
CDY15058	Canola	nucleus	97.55	81.89
Bra015154.1-P	Field mustard	nucleus	85.78	67.57
AT2G04550.1	Thale cress	nucleus	83.82	66.54
PGSC0003DMT400036094	Potato	nucleus	66.18	49.63
Solyc12g005990.1.1	Tomato	nucleus	64.22	48.34
Solyc07g049410.2.1	Tomato	nucleus	62.25	48.11
PGSC0003DMT400001770	Potato	nucleus	60.29	47.13
KRH73311	Soybean	cytosol	61.76	46.49
TraesCS7B01G129500.1	Wheat	cytosol	60.29	46.42
VIT_12s0059g01650.t01	Wine grape	nucleus	61.76	46.32
KRH14828	Soybean	cytosol	61.27	46.13
TraesCS7D01G224700.1	Wheat	cytosol	59.8	46.04
TraesCS7A01G223000.1	Wheat	cytosol	59.8	46.04
EER89672	Sorghum	nucleus	60.29	45.05
Zm00001d037412_P001	Maize	nucleus	60.29	44.73
Os06t0308100-01	Rice	cytosol	59.8	43.73
Os02t0720300-01	Rice	nucleus	53.92	41.04
HORVU7Hr1G045710.4	Barley	cytosol	59.8	40.94
GSMUA_Achr9P19040_001	Banana	nucleus	54.9	40.73
TraesCS6D01G263500.1	Wheat	cytosol	54.41	40.51
TraesCS6A01G283000.1	Wheat	cytosol	53.92	40.15
EES07355	Sorghum	nucleus	52.45	39.78
GSMUA_Achr7P16900_001	Banana	cytosol	57.84	38.94
Zm00001d017863_P001	Maize	cytosol	50.98	34.32
HORVU6Hr1G071120.1	Barley	plastid	53.43	34.28
Bra020776.1-P	Field mustard	cytosol	13.24	15.0
Bra014966.1-P	Field mustard	cytosol	10.78	12.15
Bra028323.1-P	Field mustard	cytosol, mitochondrion	11.27	9.24
Bra014764.1-P	Field mustard	cytosol	18.14	5.2
Bra009705.1-P	Field mustard	nucleus	13.24	2.89

Protein Annotations

EnsemblPlants:Bra013201.1	EnsemblPlants:Bra013201.1-P	EnsemblPlantsGene:Bra013201	Gene3D:3.90.190.10	InterPro:DUSP	InterPro:IPR029021
InterPro:Prot-tyrosine_phosphatase-like	PANTHER:PTHR10159	PANTHER:PTHR10159:SF329	SEG:seg	SUPFAM:SSF52799	UniParc:UPI0002540907
UniProt:M4D9P1	MapMan:35.1	:	:	:	:

Description

AT2G04550 (E=3e-057) IBR5 | IBR5 (INDOLE-3-BUTYRIC ACID RESPONSE 5); MAP kinase phosphatase/ protein tyrosine/serine/threonine phosphatase

Coordinates

chrA03:+:19898916..19900341

Molecular Weight (calculated)

22472.5 Da

IEP (calculated)

4.836

GRAVY (calculated)

-0.331

Length

204 amino acids

Sequence
(BLAST)

001: MRKRERENPC SLCGHYHKYE EGEVCGICGH RMPDPSDVPA PQVHVSAFPS EILPEFLFLG SYDNASRSEL LKTQGISRVL NTVPMCQNLY RNSFTYHGLS
101: DDKVLQFDDA IKFLEFYQQL EAFEQAVFGS REGMMSAMSL NDPPTFGFGF PKVNNVQAQV PVFNSAPASS IFSSPASSIP PQGFTFGAAP PKPTTGDDIT
201: MEGS

Best Arabidopsis Sequence Match ( AT2G04550.1 )
(BLAST)

001: MRKRERENPC SICGHYHKYE EGEVCGVCGH CMPVSSDTVA PQQVHVSAFP SEILPEFLYL GSYDNASRSE LLKTQGISRV LNTVPMCQNL YRNSFTYHGL
101: DNEKVLQFDD AIKFLDQCEK DKARVLVHCM SGKSRSPAVV VAYLMKRKGW RLAESHQWVK QRRPSTDISP EFYQQLQEFE QGIFGSEMMS AMNINDAPTF
201: GFGFPKIDNQ AQAPVFNNAP TSSIFSSPAS SIPPQEFTFG ATPPKPTTGG DIAMDGS

Arabidopsis Description

IBR5Protein-tyrosine-phosphatase IBR5 [Source:UniProtKB/Swiss-Prot;Acc:Q84JU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.