Factsheet for Zm00001d037412_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89672	Sorghum	nucleus	94.55	95.24
TraesCS7A01G223000.1	Wheat	cytosol	80.73	83.77
TraesCS7D01G224700.1	Wheat	cytosol	80.73	83.77
TraesCS7B01G129500.1	Wheat	cytosol	80.36	83.4
Os06t0308100-01	Rice	cytosol	82.18	81.0
HORVU7Hr1G045710.4	Barley	cytosol	81.45	75.17
Solyc07g049410.2.1	Tomato	nucleus	61.09	63.64
VIT_12s0059g01650.t01	Wine grape	nucleus	62.91	63.6
CDX93055	Canola	nucleus	55.27	62.55
PGSC0003DMT400001770	Potato	nucleus	59.27	62.45
CDY15058	Canola	nucleus	54.91	62.14
AT2G04550.1	Thale cress	nucleus	57.82	61.87
CDY00870	Canola	nucleus	54.55	61.73
CDY27864	Canola	nucleus	54.18	61.32
GSMUA_Achr9P19040_001	Banana	nucleus	61.09	61.09
Bra015154.1-P	Field mustard	nucleus	57.09	60.62
Bra013201.1-P	Field mustard	nucleus	44.73	60.29
PGSC0003DMT400036094	Potato	nucleus	59.64	60.29
KRH73311	Soybean	cytosol	59.27	60.15
KRH14828	Soybean	cytosol	59.27	60.15
Zm00001d017863_P001	Maize	cytosol	65.82	59.74
Solyc12g005990.1.1	Tomato	nucleus	58.55	59.41
GSMUA_Achr7P16900_001	Banana	cytosol	62.18	56.44
Zm00001d033371_P003	Maize	cytosol	11.64	15.17
Zm00001d035600_P001	Maize	mitochondrion	21.82	7.97
Zm00001d035599_P001	Maize	cytosol	20.36	7.48
Zm00001d011037_P001	Maize	cytosol, plastid	20.0	7.1
Zm00001d009183_P008	Maize	cytosol	18.91	6.0
Zm00001d040641_P002	Maize	cytosol	18.55	4.98

Protein Annotations

EntrezGene:100285227	MapMan:18.4.23.2.2	Gene3D:3.90.190.10	ProteinID:AQK83940.1	UniProt:B4FLX8	EMBL:BT038116
InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	EMBL:EU971353	GO:GO:0003674	GO:GO:0003824	GO:GO:0004725
GO:GO:0006464	GO:GO:0006470	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0019538	GO:GO:0035335	InterPro:IPR000387
InterPro:IPR020422	InterPro:IPR029021	PFAM:PF00782	ScanProsite:PS00383	PFscan:PS50054	PFscan:PS50056
PANTHER:PTHR10159	PANTHER:PTHR10159:SF329	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	SUPFAM:SSF52799	InterPro:TYR_PHOSPHATASE_DUAL_dom
InterPro:TYR_PHOSPHATASE_dom	InterPro:Tyr_Pase_AS	UniParc:UPI00017B6B83	EnsemblPlantsGene:Zm00001d037412	EnsemblPlants:Zm00001d037412_P001	EnsemblPlants:Zm00001d037412_T001
SEG:seg	:	:	:	:	:

Description

umc21Protein-tyrosine-phosphatase IBR5

Coordinates

chr6:-:124820011..124826714

Molecular Weight (calculated)

30629.0 Da

IEP (calculated)

6.767

GRAVY (calculated)

-0.496

Length

275 amino acids

Sequence
(BLAST)

001: MRKRERENPC GICGHYHKYE EGEVCGVCGH RPPAASPVGA RQQDSAFPSE ILKEFLFLGS YDNASRSELL KTIGVSHILN TVPLCQNLYR NSFTYHCLQE
101: DKTLQFDDAN QFLEQCEREK ARVLVHCMSG KSRSAAFVIA FLMKSRGWRL AQSFQWVKER RPQVQLSDAA QQQLIEYEKK LFGSNDGSIP AQPFAPVDSL
201: PSLGFGFPKP PGDIQAPTFN QQAPASIFER VTPNSFPSNF IFGAERTSDS DAKLPDSNNF GVVNSSGSDS MMDSS

Best Arabidopsis Sequence Match ( AT2G04550.1 )
(BLAST)

001: MRKRERENPC SICGHYHKYE EGEVCGVCGH CMPVSSDTVA PQQVHVSAFP SEILPEFLYL GSYDNASRSE LLKTQGISRV LNTVPMCQNL YRNSFTYHGL
101: DNEKVLQFDD AIKFLDQCEK DKARVLVHCM SGKSRSPAVV VAYLMKRKGW RLAESHQWVK QRRPSTDISP EFYQQLQEFE QGIFGSEMMS AMNINDAPTF
201: GFGFPKIDNQ AQAPVFNNAP TSSIFSSPAS SIPPQEFTFG ATPPKPTTGG DIAMDGS

Arabidopsis Description

IBR5Protein-tyrosine-phosphatase IBR5 [Source:UniProtKB/Swiss-Prot;Acc:Q84JU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.