Factsheet for GSMUA_Achr9P19040_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P16900_001	Banana	cytosol	74.55	67.66
VIT_12s0059g01650.t01	Wine grape	nucleus	64.36	65.07
Zm00001d037412_P001	Maize	nucleus	61.09	61.09
EER89672	Sorghum	nucleus	60.36	60.81
TraesCS7D01G224700.1	Wheat	cytosol	58.18	60.38
TraesCS7A01G223000.1	Wheat	cytosol	57.82	60.0
TraesCS7B01G129500.1	Wheat	cytosol	57.82	60.0
EES07355	Sorghum	nucleus	57.82	59.11
AT2G04550.1	Thale cress	nucleus	54.91	58.75
Os06t0308100-01	Rice	cytosol	58.91	58.06
Solyc07g049410.2.1	Tomato	nucleus	55.64	57.95
CDY27864	Canola	nucleus	50.91	57.61
CDX93055	Canola	nucleus	50.91	57.61
Solyc12g005990.1.1	Tomato	nucleus	56.73	57.56
Bra015154.1-P	Field mustard	nucleus	54.18	57.53
PGSC0003DMT400001770	Potato	nucleus	54.55	57.47
Os02t0720300-01	Rice	nucleus	56.0	57.46
CDY00870	Canola	nucleus	50.55	57.2
KRH14828	Soybean	cytosol	56.36	57.2
KRH73311	Soybean	cytosol	56.36	57.2
PGSC0003DMT400036094	Potato	nucleus	56.36	56.99
TraesCS6D01G263500.1	Wheat	cytosol	56.73	56.93
CDY15058	Canola	nucleus	50.18	56.79
TraesCS6A01G283000.1	Wheat	cytosol	56.36	56.57
Bra013201.1-P	Field mustard	nucleus	40.73	54.9
HORVU7Hr1G045710.4	Barley	cytosol	57.82	53.36
Zm00001d017863_P001	Maize	cytosol	57.82	52.48
HORVU6Hr1G071120.1	Barley	plastid	56.36	48.74
GSMUA_Achr7P21200_001	Banana	cytosol	16.36	25.28
GSMUA_Achr7P21120_001	Banana	cytosol	15.64	23.89
GSMUA_Achr4P00410_001	Banana	mitochondrion	16.36	23.44
GSMUA_Achr6P12120_001	Banana	cytosol	19.64	7.64
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, nucleus	21.45	7.14
GSMUA_Achr10P...	Banana	cytosol	14.91	6.15
GSMUA_Achr11P...	Banana	cytosol	18.91	5.96
GSMUA_Achr9P31030_001	Banana	cytosol	18.91	5.91
GSMUA_Achr6P23510_001	Banana	nucleus	15.64	5.91
GSMUA_Achr9P16510_001	Banana	cytosol	18.18	5.45
GSMUA_Achr3P08210_001	Banana	nucleus	17.09	5.13

Protein Annotations

MapMan:18.4.23.2.2	Gene3D:3.90.190.10	InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004725	GO:GO:0006464	GO:GO:0006470	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0019538	GO:GO:0035335
EnsemblPlantsGene:GSMUA_Achr9G19040_001	EnsemblPlants:GSMUA_Achr9P19040_001	EnsemblPlants:GSMUA_Achr9T19040_001	InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029021
UniProt:M0U1L1	PFAM:PF00782	ScanProsite:PS00383	PFscan:PS50054	PFscan:PS50056	PANTHER:PTHR10159
PANTHER:PTHR10159:SF329	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	SUPFAM:SSF52799	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom
InterPro:Tyr_Pase_AS	UniParc:UPI000295A30F	:	:	:	:

Description

Protein-tyrosine-phosphatase IBR5 [Source:GMGC_GENE;Acc:GSMUA_Achr9G19040_001]

Coordinates

chr9:-:17486279..17496768

Molecular Weight (calculated)

30923.8 Da

IEP (calculated)

7.165

GRAVY (calculated)

-0.373

Length

275 amino acids

Sequence
(BLAST)

001: MRKRERENPC DVCGHYHKYE EGEVCGVCGH RVAAALARPI QQSSAFPSEI VKDFLYLGSY DNASRREILK TLGITHVLNT VPTCQNLYKN SFTYHCLQDN
101: KSLQFDEANQ FLEKCDKDKA RVLVHCMLGK NRSPAIVIAY LMKCKGWRFL QSYQWVKDRR PMVELSPAIH QQLLEYEGKL FGSSEAMTLQ LSISHDSAAS
201: ESLPSFGFGF PKAADTSSAP MFNQPTSSVL ERSIPNAFGN DFVFGAERNI EQRMMETGAF VIVPPNASET PMDSS

Best Arabidopsis Sequence Match ( AT2G04550.1 )
(BLAST)

001: MRKRERENPC SICGHYHKYE EGEVCGVCGH CMPVSSDTVA PQQVHVSAFP SEILPEFLYL GSYDNASRSE LLKTQGISRV LNTVPMCQNL YRNSFTYHGL
101: DNEKVLQFDD AIKFLDQCEK DKARVLVHCM SGKSRSPAVV VAYLMKRKGW RLAESHQWVK QRRPSTDISP EFYQQLQEFE QGIFGSEMMS AMNINDAPTF
201: GFGFPKIDNQ AQAPVFNNAP TSSIFSSPAS SIPPQEFTFG ATPPKPTTGG DIAMDGS

Arabidopsis Description

IBR5Protein-tyrosine-phosphatase IBR5 [Source:UniProtKB/Swiss-Prot;Acc:Q84JU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.