CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14828	Soybean	cytosol	96.31	96.31
VIT_12s0059g01650.t01	Wine grape	nucleus	76.38	76.1
PGSC0003DMT400036094	Potato	nucleus	69.37	69.12
Solyc12g005990.1.1	Tomato	nucleus	67.53	67.53
Solyc07g049410.2.1	Tomato	nucleus	64.94	66.67
AT2G04550.1	Thale cress	nucleus	63.1	66.54
CDX93055	Canola	nucleus	58.67	65.43
PGSC0003DMT400001770	Potato	nucleus	62.73	65.13
CDY15058	Canola	nucleus	58.3	65.02
CDY00870	Canola	nucleus	56.83	63.37
CDY27864	Canola	nucleus	56.46	62.96
Bra015154.1-P	Field mustard	nucleus	60.15	62.93
TraesCS7B01G129500.1	Wheat	cytosol	60.52	61.89
Bra013201.1-P	Field mustard	nucleus	46.49	61.76
TraesCS7D01G224700.1	Wheat	cytosol	60.15	61.51
TraesCS7A01G223000.1	Wheat	cytosol	59.78	61.13
Zm00001d037412_P001	Maize	nucleus	60.15	59.27
Os06t0308100-01	Rice	cytosol	60.52	58.78
EER89672	Sorghum	nucleus	59.04	58.61
TraesCS6D01G263500.1	Wheat	cytosol	57.93	57.3
TraesCS6A01G283000.1	Wheat	cytosol	57.93	57.3
EES07355	Sorghum	nucleus	56.46	56.88
GSMUA_Achr9P19040_001	Banana	nucleus	57.2	56.36
HORVU7Hr1G045710.4	Barley	cytosol	60.15	54.7
Os02t0720300-01	Rice	nucleus	53.87	54.48
GSMUA_Achr7P16900_001	Banana	cytosol	59.41	53.14
Zm00001d017863_P001	Maize	cytosol	54.98	49.17
HORVU6Hr1G071120.1	Barley	plastid	57.2	48.74
KRH51034	Soybean	cytosol	16.97	27.22
KRH02116	Soybean	cytosol	17.34	25.82
KRG97518	Soybean	nucleus	24.35	10.8
KRH31354	Soybean	nucleus, plastid	24.72	10.09
KRH43105	Soybean	cytosol	23.25	9.63
KRH59249	Soybean	cytosol	22.88	9.39
KRH01585	Soybean	nucleus	21.77	6.94
KRH70517	Soybean	nucleus	21.4	6.92
KRH41072	Soybean	cytosol	18.45	5.43
KRH59756	Soybean	cytosol	18.45	5.42
KRH63849	Soybean	cytosol	18.08	5.33
KRH54116	Soybean	cytosol	17.34	4.52

Protein Annotations

EntrezGene:100808721	MapMan:18.4.23.2.2	Gene3D:3.90.190.10	EMBL:ACUP02001273	InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom
EnsemblPlantsGene:GLYMA_02G266300	GO:GO:0003674	GO:GO:0003824	GO:GO:0004725	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006470	GO:GO:0007154	GO:GO:0007165
GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787
GO:GO:0016791	GO:GO:0019538	GO:GO:0035335	GO:GO:0043407	UniProt:I1JIH0	InterPro:IPR000387
InterPro:IPR020422	InterPro:IPR029021	EnsemblPlants:KRH73311	ProteinID:KRH73311	ProteinID:KRH73311.1	PFAM:PF00782
ScanProsite:PS00383	PFscan:PS50054	PFscan:PS50056	PANTHER:PTHR10159	PANTHER:PTHR10159:SF329	InterPro:Prot-tyrosine_phosphatase-like
SMART:SM00195	SUPFAM:SSF52799	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom	InterPro:Tyr_Pase_AS	UniParc:UPI0001CAB4D7
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:45102116..45107373

Molecular Weight (calculated)

30069.6 Da

IEP (calculated)

7.360

GRAVY (calculated)

-0.430

Length

271 amino acids

Sequence
(BLAST)

001: MRKRERENPC GVCGHYHKYE EGEVCSICGH RIPVGSEKTS IQVSAFPSVV LPEFLYLGSY DNASRSELLK TQGISRILNT VPSCQNLYKN SFTYHCLPDD
101: KTLPFDEAIQ FLEQCEKDKE RVLVHCMSGK SRSPAIVIAY LMKFKGWRLA QSYQWVKERR PSVELTQGVY QQLQEFEQKI YGPIDSGSSV PPGFLPTAPS
201: ISFGFPKIND PAQLPSFSTA GTPSIFARAP LDIAPTEFTF GAGQTQKNVA GNPYNANPAN PNGTDIQMDG S

Best Arabidopsis Sequence Match ( AT2G04550.1 )
(BLAST)

001: MRKRERENPC SICGHYHKYE EGEVCGVCGH CMPVSSDTVA PQQVHVSAFP SEILPEFLYL GSYDNASRSE LLKTQGISRV LNTVPMCQNL YRNSFTYHGL
101: DNEKVLQFDD AIKFLDQCEK DKARVLVHCM SGKSRSPAVV VAYLMKRKGW RLAESHQWVK QRRPSTDISP EFYQQLQEFE QGIFGSEMMS AMNINDAPTF
201: GFGFPKIDNQ AQAPVFNNAP TSSIFSSPAS SIPPQEFTFG ATPPKPTTGG DIAMDGS

Arabidopsis Description

IBR5Protein-tyrosine-phosphatase IBR5 [Source:UniProtKB/Swiss-Prot;Acc:Q84JU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.