CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH13458
KRH21856

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G23720.1	KRH13458	AT1G53510.1	19392697
AT5G23720.1	KRH21856	AT1G53510.1	19392697

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63849	Soybean	cytosol	78.75	89.02
KRH41072	Soybean	cytosol	63.75	72.07
KRH59756	Soybean	cytosol	63.46	71.58
VIT_17s0000g00360.t01	Wine grape	cytosol	59.71	66.7
PGSC0003DMT400036964	Potato	cytosol	57.69	65.5
Solyc03g118350.2.1	Tomato	cytosol	58.08	65.3
CDX88046	Canola	nucleus	51.54	61.47
CDX80384	Canola	nucleus	51.63	61.23
AT5G23720.1	Thale cress	nucleus	53.37	59.74
Bra009705.1-P	Field mustard	nucleus	52.88	58.95
GSMUA_Achr9P16510_001	Banana	cytosol	51.63	58.5
GSMUA_Achr9P31030_001	Banana	cytosol	48.65	57.5
GSMUA_Achr3P08210_001	Banana	nucleus	50.48	57.25
GSMUA_Achr11P...	Banana	cytosol	47.5	56.65
TraesCS7D01G521000.1	Wheat	cytosol	46.15	56.14
TraesCS7A01G533600.2	Wheat	cytosol	45.96	55.91
HORVU7Hr1G117420.1	Barley	vacuole	45.87	55.79
TraesCS7B01G450800.1	Wheat	cytosol	45.58	55.44
EES00653	Sorghum	cytosol	49.23	55.17
HORVU1Hr1G065070.6	Barley	cytosol	48.08	54.88
EES00724	Sorghum	cytosol	45.48	54.56
TraesCS1D01G265200.5	Wheat	cytosol	48.46	54.37
TraesCS1A01G265000.2	Wheat	cytosol	48.37	54.32
Os01t0311500-01	Rice	nucleus	48.37	54.32
Os01t0347000-01	Rice	plasma membrane	45.48	54.31
Zm00001d009183_P008	Maize	cytosol	45.1	54.16
TraesCS1B01G275700.3	Wheat	cytosol	48.27	54.09
PGSC0003DMT400036963	Potato	cytosol	19.23	53.62
Zm00001d040641_P002	Maize	cytosol	49.13	49.9
KRH02116	Soybean	cytosol	5.29	30.22
KRH51034	Soybean	cytosol	4.9	30.18
KRH73311	Soybean	cytosol	4.52	17.34
KRH14828	Soybean	cytosol	4.52	17.34
KRH31354	Soybean	nucleus, plastid	7.88	12.35
KRH59249	Soybean	cytosol	7.5	11.82
KRH43105	Soybean	cytosol	7.4	11.77
KRH70517	Soybean	nucleus	9.42	11.69
KRH01585	Soybean	nucleus	9.42	11.53
KRG97518	Soybean	nucleus	6.25	10.64

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.23.2.2	Gene3D:3.90.190.10	EMBL:ACUP02003494	InterPro:Actin-fragmin_kin_cat_dom
ncoils:Coil	InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	EnsemblPlantsGene:GLYMA_06G165300	GO:GO:0003674	GO:GO:0003676
GO:GO:0003824	GO:GO:0004721	GO:GO:0004725	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006259	GO:GO:0006464	GO:GO:0006470
GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009719	GO:GO:0009737
GO:GO:0009987	GO:GO:0015074	GO:GO:0016043	GO:GO:0016301	GO:GO:0016310	GO:GO:0016311
GO:GO:0016740	GO:GO:0016787	GO:GO:0016791	GO:GO:0019538	GO:GO:0035335	GO:GO:0043622
InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029021	UniProt:K7KVG7	EnsemblPlants:KRH54116	ProteinID:KRH54116
ProteinID:KRH54116.1	InterPro:Kinase-like_dom_sf	PFAM:PF00782	PFAM:PF09192	InterPro:PHS1	ScanProsite:PS00383
PFscan:PS50054	PFscan:PS50056	PANTHER:PTHR10159	PANTHER:PTHR10159:SF346	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195
SUPFAM:SSF52799	SUPFAM:SSF56112	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom	InterPro:Tyr_Pase_AS	UniParc:UPI000294C9CC
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:13703116..13712307

Molecular Weight (calculated)

115756.0 Da

IEP (calculated)

6.659

GRAVY (calculated)

-0.392

Length

1040 amino acids

Sequence
(BLAST)

0001: MAKDKEQLKQ DPTAITTSSQ NQNQAQEFQG KGEVEKEEEA EAPLTLSVTS KVLNMLGDIT AGPASMFAQW LQLVRKRTSN SRTSGFPHRS SSMPSSPGES
0101: IEDAKNDQQT EFSLWERLGK AEMLDIESSS FSWDRLSSLH HTEHTSSNEH SEDEINRALE VTVNSGGVVF FAFFNGFGND DASPKEAAAV IKISSSRMAT
0201: QSERLGYEFA KQLGVQTPQA RVIHNTSLEW TQIKEATEKA RDVASSAGDE VDEMTCTVFV KELGHLTYFL GLEVHYHHQG ISLCQHKYIQ DLVQLAGLPN
0301: ATPVDTPMEV NVKYRRDEGE LLDDPTHYRK LVGSLIYLTI TRLDISFVVH TVSKFMQSPR HLHLLAVKQI IRYLLGTPKH GLFFPADSSV QLQAYSDADW
0401: AELLEALELS RCLMFMSYVH SSPLLESTTA FESQELAERT SAALDRIMLL DLVIRNEDRL PCRQLRWRGN SANLLLAEKI ISSTDTAGET PDSAMNSYGQ
0501: RANRALQKEK SFKSQTSLES MLTNFIVAID SGVPRRPPVG KRTDDQVSYP KLVELLLNSS EFSSNLLHDI TGGRLGFPHE DTNTITDVHH TTDVTSVVHV
0601: FRSGFRAALR DLQGFHIFLL TLHQKLDNLL RSFMNAIGKI SSGESEKEDA VVPGSASPTV FGSCPSPSSK ERLSNDIHQD CSDSESQRTA PRASSSSGKR
0701: DCCDSASSVS REGWHGKHSK GSADSLRALR LTTKLRDLHK LAKVDSESHK EFEHWNEMLK NDAVKLCLEH NFNTGFFEGC ENNTVVDAYE LKVRLEHILE
0801: RIACISEAAN TEKPSAVTNS LFIGGALAAR STYTLQRLGI THILCLCTNE IGQSDSQFPD LFMYTNFSVC DTEDSNISSI FEEACDFIDY VEQAGRSILV
0901: HCFEGKSRSA TLVLAYLMLR KKFTLLEAWS ALKRVHRRSQ PNDGFAKILL ELDLKLHGKV SMEWQQRKPM MKVCPICGKN AGLSSSSLKL HLQKSHKRLS
1001: SGSVDSAMTM EIQKALTTLK ISRGGSVSPK PRKSHSTIEA

Best Arabidopsis Sequence Match ( AT5G23720.1 )
(BLAST)

001: MAEPEKKRDQ PFSQEKDEEK DLYLVHDEHE SPLPLTVTSR VLYMLGDIAS GPAYRFTQWL DLVRKRSATY GSSGFPHRLH RIDDMVTSAG ERNTDPKSPP
101: SRQSSEISLW ERLGKASTVD IDSSCFSWNM LSSLHHTEHS SSTDHSEEDQ SKPLEVTVNS GGVVFFALFN SSSSEDASRK EEAAVIKFAS SRMATQSERL
201: GYEFSKWLGV QIPQARVIHS CNPEWTLIKE ATEKAQAKAT SEGDEVGEMT CSELLEALEL SRCLLLMSYV HGCPMLESMS SFETEEKAER AAAALGRILV
301: LDLVIRNEDR LPCRQLRWRG NPANLLLTDR IVSSAKHHEC SFDEAFDSAI KRYHPKDYRS IQRERRASSV DSRSRLSISD QMLVSQASDF SDITESPRSY
401: DTGLMSPMSD RSVAADFHLV AIDSGVPRRP PAGKRASDQE IYPRLVELLL NSSQYSSNLL HEITEGSLGY PQAEDGEETS NVRSVVTPVV REFRNGFRAG
501: LRDLQEFHIF LVTLHQKLDV LLRAFFSMMD KTMCADFDRE DFAVPESPSH THGHEVNHYP SPSKDRVPSD NSSDHSESDM QKSVPRTPNS ENKEDGSSPK
601: SRESWHGRSG KGGESLSSQR LAAKLRDFHK FAKVDAESNK ELDQWNETLR NEVMKLCQEN GFNTGFFEGS DNNSCTDAYE LKVRLEHILE RISLISKAAN
701: TEKPSMIQEN LFIGGGLAAR SIYTLQHLGI THVLCLCANE IGQSDTQYPD LFEYQNFSIT DDEDSNIESI FQEALDFIKH GEETGGKILV HCFEGRSRSA
801: TVVLAYLMLQ KKLTLLEAWS KLRKVHRRAQ PNDGFARILI NLDKKCHGKV SMEWRQRKPT MKVCPVCGKN AGLSSSSLKL HLQKSHRKLS SGSVDSAMNM
901: EIQKALEALK LSTGRGSSAS SNSFQSHPG

Arabidopsis Description

PHS1Dual specificity protein phosphatase PHS1 [Source:UniProtKB/Swiss-Prot;Acc:Q75QN6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.