Factsheet for Solyc03g118350.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc07g062080.2.1
Solyc10g007500.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G23720.1	Solyc07g062080.2.1	AT1G53510.1	19392697
AT5G23720.1	Solyc10g007500.2.1	AT1G53510.1	19392697

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036964	Potato	cytosol	97.19	98.14
VIT_17s0000g00360.t01	Wine grape	cytosol	74.05	73.58
KRH41072	Soybean	cytosol	71.14	71.52
KRH59756	Soybean	cytosol	70.81	71.04
KRH63849	Soybean	cytosol	68.22	68.59
CDX88046	Canola	nucleus	62.7	66.51
CDX80384	Canola	nucleus	62.92	66.36
Bra009705.1-P	Field mustard	nucleus	66.16	65.59
AT5G23720.1	Thale cress	nucleus	65.73	65.45
GSMUA_Achr9P16510_001	Banana	cytosol	61.19	61.66
GSMUA_Achr9P31030_001	Banana	cytosol	57.73	60.68
GSMUA_Achr3P08210_001	Banana	nucleus	59.89	60.41
GSMUA_Achr11P...	Banana	cytosol	56.76	60.21
KRH54116	Soybean	cytosol	65.3	58.08
EES00724	Sorghum	cytosol	54.38	58.02
Zm00001d009183_P008	Maize	cytosol	54.27	57.97
EES00653	Sorghum	cytosol	58.05	57.87
HORVU1Hr1G065070.6	Barley	cytosol	56.65	57.52
Os01t0311500-01	Rice	nucleus	57.51	57.45
Os01t0347000-01	Rice	plasma membrane	53.73	57.06
TraesCS1A01G265000.2	Wheat	cytosol	56.86	56.8
TraesCS1B01G275700.3	Wheat	cytosol	56.97	56.79
TraesCS1D01G265200.5	Wheat	cytosol	56.86	56.74
TraesCS7B01G450800.1	Wheat	cytosol	52.43	56.73
TraesCS7A01G533600.2	Wheat	cytosol	52.32	56.61
TraesCS7D01G521000.1	Wheat	cytosol	52.22	56.49
HORVU7Hr1G117420.1	Barley	vacuole	52.22	56.49
Zm00001d040641_P002	Maize	cytosol	57.84	52.25
Solyc01g080040.2.1	Tomato	cytosol	5.95	30.73
Solyc07g049410.2.1	Tomato	nucleus	5.3	18.56
Solyc12g005990.1.1	Tomato	nucleus	5.19	17.71
Solyc05g054700.2.1	Tomato	cytosol	10.27	10.73
Solyc05g013750.2.1	Tomato	nucleus	9.08	9.62

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:1.10.1070.11	MapMan:18.4.23.2.2	Gene3D:3.90.190.10	InterPro:Actin-fragmin_kin_cat_dom
InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004725
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006470
GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009737	GO:GO:0009987
GO:GO:0010119	GO:GO:0010468	GO:GO:0016043	GO:GO:0016301	GO:GO:0016310	GO:GO:0016311
GO:GO:0016740	GO:GO:0016787	GO:GO:0016791	GO:GO:0019538	GO:GO:0035335	GO:GO:0043622
InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029021	InterPro:IPR036940	UniProt:K4BLY6	InterPro:Kinase-like_dom_sf
PFAM:PF00782	PFAM:PF09192	InterPro:PHS1	InterPro:PI3/4_kinase_cat_sf	ScanProsite:PS00383	PFscan:PS50054
PFscan:PS50056	PANTHER:PTHR10159	PANTHER:PTHR10159:SF346	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	SUPFAM:SSF52799
SUPFAM:SSF56112	EnsemblPlantsGene:Solyc03g118350.2	EnsemblPlants:Solyc03g118350.2.1	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom	InterPro:Tyr_Pase_AS
UniParc:UPI0002767C36	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3:-:67252702..67260315

Molecular Weight (calculated)

102780.0 Da

IEP (calculated)

5.732

GRAVY (calculated)

-0.423

Length

925 amino acids

Sequence
(BLAST)

001: MTNENQEDMY SLQREEEKDF DLGSDEPEAP LPLTVTSRVL YMLGDITAGP AYRFAQWLEL VRKRSSKYRS SGFPRRADSM PLSAEELSLD QIDPLPSEPT
101: TEVSLWERLG KAAVSDIESS TFSWNMLSSL HHTEHNSSTE QSEDETNKAL EVTVNSGGVV FFALFNELEN DDASPKEAAA VIKISSSRMA TQSERLGYEF
201: AKWLGVQTPQ ARVIHNCSPE WLQIKEAAEK AKDAAISEGD EIVEMTCSEL LEALELSRCL LLMNYIHGSP LLESSNAFDS REAGERTAAA LGRVLMLDLV
301: IRNEDRLPCR HLRWRGNPAN LLLADKVSSV NMDALAAAFD SAIDRYRPRV IRALQKERRA NSVDSRISTP NPGLISQSSD LSDITESPKS CNLSVSQTSN
401: ETTCMYFHVV AIDSGVPRRP PAGKRASDQE NYPKLVELLI NSPEYASKLL YEITGGKLGS SPEASDAMNN NQAADLASIG HEFRIGFRAA LRDLQGFHIF
501: LLTLHQKLDS VFRVFLGVIN RASAGDLEKE DMVIPESPSQ SAGFVGHCPS TPSKERVPSD TYLDSNESEC QRTAPRPSSS GCRDSLDSMV SPNSRDSQGK
601: CHKSSGEPLR SLRLTSKLRD FHKFAKVDAE LNKELEQWTE MLKSDAIKMC QENNFNTGFF EGSDSNYVVD AYELKVRLEH ILERISLIFD AANTEKPSAI
701: SGSLFIGGAL AARSVHTLQH IGITHILCLC ANETGQSDSQ FPDLFEYKNF SICDDEDSNI SALFEEAHNF IDHVEEKGGK VLVHCFEGRS RSATVVLAYL
801: MLRKKFTLLK AWNTLRRVHR RAQPNDGFAK ILLDLDRKLH GKVSMEWQQR KPIMKVCPIC GKNAGLSSSS LKLHLQKAHK KLSSGSVDSA MNMEIQKALD
901: ALKISRGGSV SPTQRQSSMI EEFES

Best Arabidopsis Sequence Match ( AT5G23720.1 )
(BLAST)

001: MAEPEKKRDQ PFSQEKDEEK DLYLVHDEHE SPLPLTVTSR VLYMLGDIAS GPAYRFTQWL DLVRKRSATY GSSGFPHRLH RIDDMVTSAG ERNTDPKSPP
101: SRQSSEISLW ERLGKASTVD IDSSCFSWNM LSSLHHTEHS SSTDHSEEDQ SKPLEVTVNS GGVVFFALFN SSSSEDASRK EEAAVIKFAS SRMATQSERL
201: GYEFSKWLGV QIPQARVIHS CNPEWTLIKE ATEKAQAKAT SEGDEVGEMT CSELLEALEL SRCLLLMSYV HGCPMLESMS SFETEEKAER AAAALGRILV
301: LDLVIRNEDR LPCRQLRWRG NPANLLLTDR IVSSAKHHEC SFDEAFDSAI KRYHPKDYRS IQRERRASSV DSRSRLSISD QMLVSQASDF SDITESPRSY
401: DTGLMSPMSD RSVAADFHLV AIDSGVPRRP PAGKRASDQE IYPRLVELLL NSSQYSSNLL HEITEGSLGY PQAEDGEETS NVRSVVTPVV REFRNGFRAG
501: LRDLQEFHIF LVTLHQKLDV LLRAFFSMMD KTMCADFDRE DFAVPESPSH THGHEVNHYP SPSKDRVPSD NSSDHSESDM QKSVPRTPNS ENKEDGSSPK
601: SRESWHGRSG KGGESLSSQR LAAKLRDFHK FAKVDAESNK ELDQWNETLR NEVMKLCQEN GFNTGFFEGS DNNSCTDAYE LKVRLEHILE RISLISKAAN
701: TEKPSMIQEN LFIGGGLAAR SIYTLQHLGI THVLCLCANE IGQSDTQYPD LFEYQNFSIT DDEDSNIESI FQEALDFIKH GEETGGKILV HCFEGRSRSA
801: TVVLAYLMLQ KKLTLLEAWS KLRKVHRRAQ PNDGFARILI NLDKKCHGKV SMEWRQRKPT MKVCPVCGKN AGLSSSSLKL HLQKSHRKLS SGSVDSAMNM
901: EIQKALEALK LSTGRGSSAS SNSFQSHPG

Arabidopsis Description

PHS1Dual specificity protein phosphatase PHS1 [Source:UniProtKB/Swiss-Prot;Acc:Q75QN6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.