Factsheet for PGSC0003DMT400036964

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400018188
PGSC0003DMT400054750

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G23720.1	PGSC0003DMT400018188	AT1G53510.1	19392697
AT5G23720.1	PGSC0003DMT400054750	AT1G53510.1	19392697

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036963	Potato	cytosol	40.39	99.2
Solyc03g118350.2.1	Tomato	cytosol	98.14	97.19
VIT_17s0000g00360.t01	Wine grape	cytosol	74.24	73.04
KRH41072	Soybean	cytosol	71.94	71.63
KRH59756	Soybean	cytosol	71.72	71.26
KRH63849	Soybean	cytosol	68.45	68.15
CDX88046	Canola	nucleus	63.43	66.63
CDX80384	Canola	nucleus	63.65	66.48
Bra009705.1-P	Field mustard	nucleus	66.92	65.7
AT5G23720.1	Thale cress	nucleus	66.27	65.34
GSMUA_Achr9P16510_001	Banana	cytosol	61.9	61.76
GSMUA_Achr9P31030_001	Banana	cytosol	58.62	61.02
GSMUA_Achr11P...	Banana	cytosol	57.64	60.55
GSMUA_Achr3P08210_001	Banana	nucleus	60.59	60.52
EES00724	Sorghum	cytosol	55.02	58.13
Zm00001d009183_P008	Maize	cytosol	54.91	58.08
EES00653	Sorghum	cytosol	58.52	57.76
KRH54116	Soybean	cytosol	65.5	57.69
Os01t0311500-01	Rice	nucleus	58.08	57.45
Os01t0347000-01	Rice	plasma membrane	54.48	57.29
HORVU1Hr1G065070.6	Barley	cytosol	56.88	57.19
TraesCS7B01G450800.1	Wheat	cytosol	53.28	57.08
TraesCS7A01G533600.2	Wheat	cytosol	53.17	56.96
TraesCS7D01G521000.1	Wheat	cytosol	53.06	56.84
HORVU7Hr1G117420.1	Barley	vacuole	53.06	56.84
TraesCS1B01G275700.3	Wheat	cytosol	57.1	56.36
TraesCS1D01G265200.5	Wheat	cytosol	56.99	56.31
TraesCS1A01G265000.2	Wheat	cytosol	56.77	56.16
Zm00001d040641_P002	Maize	cytosol	58.3	52.15
PGSC0003DMT400001770	Potato	nucleus	5.35	18.77
PGSC0003DMT400036094	Potato	nucleus	5.02	16.91
PGSC0003DMT400060202	Potato	cytosol	10.37	10.75
PGSC0003DMT400030617	Potato	nucleus	9.06	9.5

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:1.10.1070.11	MapMan:18.4.23.2.2	Gene3D:3.90.190.10	InterPro:Actin-fragmin_kin_cat_dom
InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004725
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006470
GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009737	GO:GO:0009987
GO:GO:0010119	GO:GO:0010468	GO:GO:0016043	GO:GO:0016301	GO:GO:0016310	GO:GO:0016311
GO:GO:0016740	GO:GO:0016787	GO:GO:0016791	GO:GO:0019538	GO:GO:0035335	GO:GO:0043622
InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029021	InterPro:IPR036940	InterPro:Kinase-like_dom_sf	UniProt:M1B4K3
PFAM:PF00782	PFAM:PF09192	EnsemblPlantsGene:PGSC0003DMG401014249	PGSC:PGSC0003DMG401014249	EnsemblPlants:PGSC0003DMT400036964	InterPro:PHS1
InterPro:PI3/4_kinase_cat_sf	ScanProsite:PS00383	PFscan:PS50054	PFscan:PS50056	PANTHER:PTHR10159	PANTHER:PTHR10159:SF346
InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	SUPFAM:SSF52799	SUPFAM:SSF56112	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom
InterPro:Tyr_Pase_AS	UniParc:UPI00029488FC	SEG:seg	:	:	:

Description

Phosphoprotein phosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG401014249]

Coordinates

chr3:-:57910895..57918186

Molecular Weight (calculated)

101751.0 Da

IEP (calculated)

5.902

GRAVY (calculated)

-0.411

Length

916 amino acids

Sequence
(BLAST)

001: MYLQREEEKD FDLGSDEPEA PLPLTVTSRV LYMLGDITAG PAYRFAQWLE LVRKRSSKYR SSGFPRRADS MPLSAEELSL DQVDPLPSEP TTEVSLWERL
101: GKAAVSDIES STFSWNMLSS LHHTEHNSST EQSEDETNKA LEVTVNSGGV VFFALFNELE NDDASPKEAA AVIKISSSRM ATQSERLGYE FAKWLGVQTP
201: QSRVIHNCSP EWLQIKEAAE KAKDAAISEG DEIVEMTCSE LLEALELSRC LLLMNYIHGS PLLESSNAFD SREAGERTAA ALGRVLMLDL VIRNEDRLPC
301: RHLRWRGNPA NLLLADKVNS VNLDALAAAF DSAIDRYRPR VIRALQKERR ANSVDSRIST PNPGLISQSS DLSDITESPK SCNLSVSQTS NETTCPYFHV
401: VAIDSGVPRR PPAGKRASDQ ENYPKLVELL INSPEYASKL LYEITGGKLG SSLEASDAMN NNQAADLASI GHEFRIGFRA ALRDLQGFHI FLLTLHQKLD
501: SVFRVFLGVI NRASAGDLEK EDMVIPESPS QSAGFVGHCP STPSKERAPS ETYLDSNESE CQRTAPRPSS SGYRDSLDSM VSPNSRDSQG KCHKSSGEPL
601: RSLRLTSKLR DFHKFAKVDA ELNKELEQWT EMLKSDAIKM CQENNFNTGF FEGSDSNYVV DAYELKVRLE HILERISLIF DAASTEKPSA ISSSLFIGGA
701: LAARSVYTLQ HLGITHILCL CANETGQSDS QFPDLFEYKN FSICDDEDSN ISGLFEEAHN FIDHVEEKGG KVLVHCFEGR SRSATVVLAY LMLRKKLTLL
801: KAWNTLRRVH RRAQPNDGFA KILLDLDRKL HGKVSMEWQQ RKPIMKVCPI CGKNAGLSSS SLKLHLQKAH KKLSSGSVDS AMNMEIQKAL DALKISRGGS
901: VSPTQRQSSM IEEFES

Best Arabidopsis Sequence Match ( AT5G23720.1 )
(BLAST)

001: MAEPEKKRDQ PFSQEKDEEK DLYLVHDEHE SPLPLTVTSR VLYMLGDIAS GPAYRFTQWL DLVRKRSATY GSSGFPHRLH RIDDMVTSAG ERNTDPKSPP
101: SRQSSEISLW ERLGKASTVD IDSSCFSWNM LSSLHHTEHS SSTDHSEEDQ SKPLEVTVNS GGVVFFALFN SSSSEDASRK EEAAVIKFAS SRMATQSERL
201: GYEFSKWLGV QIPQARVIHS CNPEWTLIKE ATEKAQAKAT SEGDEVGEMT CSELLEALEL SRCLLLMSYV HGCPMLESMS SFETEEKAER AAAALGRILV
301: LDLVIRNEDR LPCRQLRWRG NPANLLLTDR IVSSAKHHEC SFDEAFDSAI KRYHPKDYRS IQRERRASSV DSRSRLSISD QMLVSQASDF SDITESPRSY
401: DTGLMSPMSD RSVAADFHLV AIDSGVPRRP PAGKRASDQE IYPRLVELLL NSSQYSSNLL HEITEGSLGY PQAEDGEETS NVRSVVTPVV REFRNGFRAG
501: LRDLQEFHIF LVTLHQKLDV LLRAFFSMMD KTMCADFDRE DFAVPESPSH THGHEVNHYP SPSKDRVPSD NSSDHSESDM QKSVPRTPNS ENKEDGSSPK
601: SRESWHGRSG KGGESLSSQR LAAKLRDFHK FAKVDAESNK ELDQWNETLR NEVMKLCQEN GFNTGFFEGS DNNSCTDAYE LKVRLEHILE RISLISKAAN
701: TEKPSMIQEN LFIGGGLAAR SIYTLQHLGI THVLCLCANE IGQSDTQYPD LFEYQNFSIT DDEDSNIESI FQEALDFIKH GEETGGKILV HCFEGRSRSA
801: TVVLAYLMLQ KKLTLLEAWS KLRKVHRRAQ PNDGFARILI NLDKKCHGKV SMEWRQRKPT MKVCPVCGKN AGLSSSSLKL HLQKSHRKLS SGSVDSAMNM
901: EIQKALEALK LSTGRGSSAS SNSFQSHPG

Arabidopsis Description

PHS1Dual specificity protein phosphatase PHS1 [Source:UniProtKB/Swiss-Prot;Acc:Q75QN6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.