Factsheet for PGSC0003DMT400036963

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400018188
PGSC0003DMT400054750

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G23720.1	PGSC0003DMT400018188	AT1G53510.1	19392697
AT5G23720.1	PGSC0003DMT400054750	AT1G53510.1	19392697

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036964	Potato	cytosol	99.2	40.39
VIT_17s0000g00360.t01	Wine grape	cytosol	65.95	26.42
KRH41072	Soybean	cytosol	65.15	26.41
KRH59756	Soybean	cytosol	63.81	25.81
KRH63849	Soybean	cytosol	59.25	24.02
Bra009705.1-P	Field mustard	nucleus	56.03	22.4
AT5G23720.1	Thale cress	nucleus	55.23	22.17
GSMUA_Achr9P16510_001	Banana	cytosol	54.16	22.0
GSMUA_Achr3P08210_001	Banana	nucleus	53.08	21.59
GSMUA_Achr9P31030_001	Banana	cytosol	50.67	21.48
GSMUA_Achr11P...	Banana	cytosol	50.13	21.45
CDX88046	Canola	nucleus	47.72	20.41
CDX80384	Canola	nucleus	47.99	20.41
HORVU7Hr1G117420.1	Barley	vacuole	45.04	19.65
Zm00001d009183_P008	Maize	cytosol	45.58	19.63
EES00724	Sorghum	cytosol	45.58	19.61
TraesCS7B01G450800.1	Wheat	cytosol	44.77	19.53
TraesCS7D01G521000.1	Wheat	cytosol	44.5	19.42
KRH54116	Soybean	cytosol	53.62	19.23
TraesCS7A01G533600.2	Wheat	cytosol	43.97	19.18
EES00653	Sorghum	cytosol	47.72	19.18
Os01t0347000-01	Rice	plasma membrane	44.5	19.06
HORVU1Hr1G065070.6	Barley	cytosol	45.31	18.55
TraesCS1B01G275700.3	Wheat	cytosol	45.31	18.21
Os01t0311500-01	Rice	nucleus	45.04	18.14
TraesCS1D01G265200.5	Wheat	cytosol	45.04	18.12
TraesCS1A01G265000.2	Wheat	cytosol	44.77	18.03
Zm00001d040641_P002	Maize	cytosol	46.38	16.89
PGSC0003DMT400030617	Potato	nucleus	3.22	1.37
PGSC0003DMT400060202	Potato	cytosol	3.22	1.36
PGSC0003DMT400001770	Potato	nucleus	0.54	0.77
PGSC0003DMT400036094	Potato	nucleus	0.54	0.74

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:1.10.1070.11	MapMan:35.1	InterPro:Actin-fragmin_kin_cat_dom	InterPro:DUSP
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0016043	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0016787	GO:GO:0019538	GO:GO:0043622	InterPro:IPR036940
InterPro:Kinase-like_dom_sf	UniProt:M1B4K2	PFAM:PF09192	EnsemblPlantsGene:PGSC0003DMG402014249	PGSC:PGSC0003DMG402014249	EnsemblPlants:PGSC0003DMT400036963
InterPro:PHS1	InterPro:PI3/4_kinase_cat_sf	PANTHER:PTHR10159	PANTHER:PTHR10159:SF346	SUPFAM:SSF56112	UniParc:UPI00029644A8

Description

Phosphoprotein phosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG402014249]

Coordinates

chr3:-:57913627..57915187

Molecular Weight (calculated)

41070.3 Da

IEP (calculated)

7.789

GRAVY (calculated)

-0.462

Length

373 amino acids

Sequence
(BLAST)

001: MTCYFSYIHG SPLLESSNAF DSREAGERTA AALGRVLMLD LVIRNEDRLP CRHLRWRGNP ANLLLADKVN SVNLDALAAA FDSAIDRYRP RVIRALQKER
101: RANSVDSRIS TPNPGLISQS SDLSDITESP KSCNLSVSQT SNETTCPYFH VVAIDSGVPR RPPAGKRASD QENYPKLVEL LINSPEYASK LLYEITGGKL
201: GSSLEASDAM NNNQAADLAS IGHEFRIGFR AALRDLQGFH IFLLTLHQKL DSVFRVFLGV INRASAGDLE KEDMVIPESP SQSAGFVGHC PSTPSKERAP
301: SETYLDSNES ECQRTAPRPS SSGYRDSLDS MVSPNSRDSQ GKCHKSSGEP LRSLRLTSKL RDFHKFAKVC DVH

Best Arabidopsis Sequence Match ( AT5G23720.2 )
(BLAST)

001: MIWSLGERNT DPKSPPSRQS SEISLWERLG KASTVDIDSS CFSWNMLSSL HHTEHSSSTD HSEEDQSKPL EVTVNSGGVV FFALFNSSSS EDASRKEEAA
101: VIKFASSRMA TQSERLGYEF SKWLGVQIPQ ARVIHSCNPE WTLIKEATEK AQAKATSEGD EVGEMTCSEL LEALELSRCL LLMSYVHGCP MLESMSSFET
201: EEKAERAAAA LGRILVLDLV IRNEDRLPCR QLRWRGNPAN LLLTDRIVSS AKHHECSFDE AFDSAIKRYH PKDYRSIQRE RRASSVDSRS RLSISDQMLV
301: SQASDFSDIT ESPRSYDTGL MSPMSDRSVA ADFHLVAIDS GVPRRPPAGK RASDQEIYPR LVELLLNSSQ YSSNLLHEIT EGSLGYPQAE DGEETSNVRS
401: VVTPVVREFR NGFRAGLRDL QEFHIFLVTL HQKLDVLLRA FFSMMDKTMC ADFDREDFAV PESPSHTHGH EVNHYPSPSK DRVPSDNSSD HSESDMQKSV
501: PRTPNSENKE DGSSPKSRES WHGRSGKGGE SLSSQRLAAK LRDFHKFAKV DAESNKELDQ WNETLRNEVM KLCQENGFNT GFFEGSDNNS CTDAYELKVR
601: LEHILERISL ISKAANTEKP SMIQENLFIG GGLAARSIYT LQHLGITHVL CLCANEIGQS DTQYPDLFEY QNFSITDDED SNIESIFQEA LDFIKHGEET
701: GGKILVHCFE GRSRSATVVL AYLMLQKKLT LLEAWSKLRK VHRRAQPNDG FARILINLDK KCHGKVSMEW RQRKPTMKVC PVCGKNAGLS SSSLKLHLQK
801: SHRKLSSGSV DSAMNMEIQK ALEALKLSTG RGSSASSNSF QSHPG

Arabidopsis Description

PHS1Dual specificity protein phosphatase PHS1 [Source:UniProtKB/Swiss-Prot;Acc:Q75QN6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.