Factsheet for PGSC0003DMT400060202

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g054700.2.1	Tomato	cytosol	95.59	95.48
VIT_13s0019g00070.t01	Wine grape	cytosol	58.6	57.56
KRH70517	Soybean	nucleus	53.96	56.92
Bra014764.1-P	Field mustard	cytosol	45.48	56.54
CDX76111	Canola	cytosol	45.36	56.48
CDY02924	Canola	cytosol	45.59	56.44
KRH01585	Soybean	nucleus	54.19	56.35
GSMUA_Achr10P...	Banana	cytosol	40.72	53.97
Zm00001d035599_P001	Maize	cytosol	45.36	53.54
TraesCS1D01G046000.2	Wheat	cytosol	45.36	53.4
OQU77254	Sorghum	cytosol	46.04	53.34
TraesCS1A01G045300.2	Wheat	nucleus	45.36	53.32
TraesCS1B01G058600.2	Wheat	cytosol	45.25	53.26
Zm00001d011037_P001	Maize	cytosol, plastid	45.81	52.26
GSMUA_Achr6P23510_001	Banana	nucleus	42.65	51.79
Zm00001d035600_P001	Maize	mitochondrion	41.74	49.0
HORVU1Hr1G008230.4	Barley	plastid	45.02	45.49
Os05t0115800-01	Rice	cytosol, plasma membrane	22.29	42.27
PGSC0003DMT400030617	Potato	nucleus	38.35	38.79
PGSC0003DMT400001770	Potato	nucleus	7.47	25.29
PGSC0003DMT400036094	Potato	nucleus	6.67	21.69
PGSC0003DMT400036964	Potato	cytosol	10.75	10.37
PGSC0003DMT400036963	Potato	cytosol	1.36	3.22

Protein Annotations

EntrezGene:102602251	MapMan:18.4.23.2.2	Gene3D:3.40.20.10	Gene3D:3.90.190.10	InterPro:ADF-H/Gelsolin-like_dom_sf	ncoils:Coil
InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004725	GO:GO:0006464
GO:GO:0006470	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	GO:GO:0016791	GO:GO:0019538	GO:GO:0035335	InterPro:IPR000387	InterPro:IPR020422
InterPro:IPR029006	InterPro:IPR029021	UniProt:M1C5E0	PFAM:PF00782	EnsemblPlantsGene:PGSC0003DMG400023418	PGSC:PGSC0003DMG400023418
EnsemblPlants:PGSC0003DMT400060202	ScanProsite:PS00383	PFscan:PS50054	PFscan:PS50056	PANTHER:PTHR10159	PANTHER:PTHR10159:SF491
InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	SUPFAM:SSF52799	SUPFAM:SSF55753	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom
InterPro:Tyr_Pase_AS	UniParc:UPI000294BD09	RefSeq:XP_006345935.1	RefSeq:XP_006345936.1	RefSeq:XP_015163572.1	SEG:seg

Description

Phosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG400023418]

Coordinates

chr5:-:50449917..50455079

Molecular Weight (calculated)

97191.6 Da

IEP (calculated)

6.141

GRAVY (calculated)

-0.344

Length

884 amino acids

Sequence
(BLAST)

001: MPGKEDASAG GADGSQEQCQ LANGRRMYWR SASWSSSRTS LPPLNPDMEK DGLDPNGSNS SHSRRPLTPR SQHSFKARSC LPPLQPLAIA RRSLDEWPRA
101: GSDDIGEWPL PATPSGRDSH SNSERLKLDL SNIHKNPEAN GGLVRREKIA FFDKECSKVA EHIYLGGDAV ARDKDILKQN GITHVLNCVG FVCPEYFKSD
201: FVYRTLWLQD SPSEDITSIL YDVFDYFEDV REQHGKIFVH CCQGVSRSTS LVIAYRMWRE GQSFDDAFEY VKAARGIADP NMGFACQLLQ CQKRVHASPL
301: SPSSLLRLYR VAPHSPYDPL HLVPKMLNDP SPSALDSRGA FIIHIPSSIY VWIGKKCEAI MERDARGAVC QIVRYEKVQG PIITVMEGEE PLYFWDAFSN
401: FLPLMDKLKN GGDVVESSSK VCPGERKVDN YDVDFEIFQK ATSGGFVPPF ASCETEHETH LPVRESSWSM LRRKFVSANM RDFVFSTKSG ISRVYPDSMF
501: ITRDNCATKQ LHSSSSMLSS SSLCSPSPTT ISLSSTSSSS SASSPPYLSP DSISSDSSIN SKCLSDSPVV SPSVISCADL ASSTPSNSSV SVLPSKISPQ
601: SISKTSKYID VNFTSQTSSQ TAPPLSKKFP LSIAERRGSL SKGLKLPLLT DDFESKAGHL KSVANDQGDI GISEVTNESF NEAATAAEIL HSPQEIIECK
701: MDELHSSLDI LGIGIPSDKE PAVFSGFHEY LEKIPCNERS TAMLNGVVDT GGASCNVVEH VVYRWPSLEK LAICSIDDLD SKGAYIFIIP TSGSGKDAGR
801: AVYVWVGRSF ICEISKIRKV RCKGLGDPGE IDWKQAATDV LHRMVLPNDT NIEVVKEDEE PAELLAFLSS PVKLTCSRTH QEFQ

Best Arabidopsis Sequence Match ( AT3G06110.3 )
(BLAST)

001: MEKVVDLFGV GEANSQKLLE GGKDLSEIQQ GLFIGSVAEA NNKDFLKSSN ITHVLTVAVA LAPPYPDDFV YKVIEVVDRS ETDLTVYFDE CYSFIDQAIQ
101: SGGGVLVHCF MGMSRSVTIV VAYLMKKHGM GFSKAMELVR SRRHQAYPNP GFISQLQQFE KSIQGNA

Arabidopsis Description

DSPTP1BDual specificity protein phosphatase 1B [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.