CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70517	Soybean	nucleus	86.82	88.07
CDY02924	Canola	cytosol	48.0	57.14
CDX76111	Canola	cytosol	47.65	57.04
Bra014764.1-P	Field mustard	cytosol	47.53	56.82
VIT_13s0019g00070.t01	Wine grape	cytosol	59.65	56.33
PGSC0003DMT400060202	Potato	cytosol	56.35	54.19
Solyc05g054700.2.1	Tomato	cytosol	56.12	53.9
GSMUA_Achr10P...	Banana	cytosol	42.24	53.82
Zm00001d035599_P001	Maize	cytosol	46.82	53.14
OQU77254	Sorghum	cytosol	47.53	52.95
TraesCS1B01G058600.2	Wheat	cytosol	45.88	51.93
TraesCS1A01G045300.2	Wheat	nucleus	45.76	51.73
TraesCS1D01G046000.2	Wheat	cytosol	45.65	51.66
GSMUA_Achr6P23510_001	Banana	nucleus	43.76	51.1
Zm00001d011037_P001	Maize	cytosol, plastid	46.59	51.1
Zm00001d035600_P001	Maize	mitochondrion	43.06	48.61
KRH31354	Soybean	nucleus, plastid	36.24	46.39
KRG97518	Soybean	nucleus	32.35	45.01
KRH43105	Soybean	cytosol	34.35	44.65
HORVU1Hr1G008230.4	Barley	plastid	45.76	44.46
KRH59249	Soybean	cytosol	33.53	43.18
Os05t0115800-01	Rice	cytosol, plasma membrane	21.53	39.27
KRH51034	Soybean	cytosol	7.06	35.5
KRH02116	Soybean	cytosol	7.06	32.97
KRH14828	Soybean	cytosol	7.18	22.51
KRH73311	Soybean	cytosol	6.94	21.77
KRH41072	Soybean	cytosol	11.88	10.98
KRH59756	Soybean	cytosol	11.88	10.95
KRH63849	Soybean	cytosol	11.41	10.54
KRH54116	Soybean	cytosol	11.53	9.42

Protein Annotations

EntrezGene:100777406	MapMan:18.4.23.2.2	Gene3D:3.40.20.10	Gene3D:3.90.190.10	EMBL:ACUP02011522	InterPro:ADF-H/Gelsolin-like_dom_sf
InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	EnsemblPlantsGene:GLYMA_18G286300	GO:GO:0003674	GO:GO:0003824	GO:GO:0004725
GO:GO:0006464	GO:GO:0006470	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0019538	GO:GO:0035335	UniProt:I1N525
InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029006	InterPro:IPR029021	EnsemblPlants:KRH01585	ProteinID:KRH01585
ProteinID:KRH01585.1	PFAM:PF00782	ScanProsite:PS00383	PFscan:PS50054	PFscan:PS50056	PANTHER:PTHR10159
PANTHER:PTHR10159:SF491	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	SUPFAM:SSF52799	SUPFAM:SSF55753	InterPro:TYR_PHOSPHATASE_DUAL_dom
InterPro:TYR_PHOSPHATASE_dom	InterPro:Tyr_Pase_AS	UniParc:UPI000294D756	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr18:+:56657022..56662164

Molecular Weight (calculated)

92922.1 Da

IEP (calculated)

7.024

GRAVY (calculated)

-0.348

Length

850 amino acids

Sequence
(BLAST)

001: MVGNDDAGHL SASRKMFWRS ASWSSSRTAA GNASSGETEK GFADSGAADG THGQNRRFGP PPLTPRSQQN CKARSCLPPL QPLSIARRSL DEWPKAGSDD
101: IGEWPQPPTT PGGRGNGSNG ERLKLDLSSI QHNNPDHSRS NNGNGLVKRD KIAFFDKECS KVADHVYLGG DAVARDRDIL KHNGITHVLN CVGFVCPEYF
201: KADFVYRTLW LQDSPSEDIT SILYDVFDYF EDVREQGGRV FVHCCQGVSR STSLVIAYLM WREGQSFDDA FQFVKAARGI ADPNMGFACQ LLQCQKRVHA
301: VPLSPSSLLR MYRIAPHSPY DPLHLVPKML VDPSLAALDS RGAFIVHIPS AIYVWVGKNC EATMERDARG AVGQIVRYEK VQGPIVMIKE GEEPVYFWDA
401: FSDFLPLMDK SGKSGSRIED GKLFVLPGKR RVDAYNVDYE VFTKAITGGF VPPFGSSGEH ETHLPARESS WSVRRKVSHG NMKEVVSVPH GNMKEVVSVP
501: RLSFPRVYSD SMLCLRTSAN AILSPSSSLS SSSSSISSSS SPSFVSPDSI TSDSSIHSKF LLEVSPDSSS LSNFSSLSIT SNSTSHNFSS LSITSNSTSQ
601: PVSHSTDILG VKLSHPLFQS ASLPLKKPST SLAERRGSLS KILMLPLMND KTQVTDKSTT SHASQESDIL VNDNVSYQQQ SDSKDYFCGS NNHAKDGGVN
701: SIQKCEPSIA DSMHLKESSL SQSTTLKGTN DSGLLQYNVA QTSVYHWPSI EKIETFGASH LDSKSAFVIF SPSMHVHAGN ILYIWVGRSF SCDASQVHLD
801: IDKQSDVGAV DWNQIGCDLL ARFSLPKNSV IKVVKENEEP SEFLALLSSL

Best Arabidopsis Sequence Match ( AT3G06110.2 )
(BLAST)

001: MEKVVDLFGV GEANSQKLLE GGKDLSEIQQ GLFIGSVAEA NNKDFLKSSN ITHVLTVAVA LAPPYPDDFV YKVIEVVDRS ETDLTVYFDE CYSFIDQAIQ
101: SGGGVLVHCF MGMSRSVTIV VAYLMKKHGM GFSKAMELVR SRRHQAYPNP GFISQLQQFE KSIQGNA

Arabidopsis Description

DSPTP1BDual specificity protein phosphatase 1B [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.