CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31354	Soybean	nucleus, plastid	88.87	81.78
KRH43105	Soybean	cytosol	61.54	57.49
KRH59249	Soybean	cytosol	61.21	56.67
VIT_01s0137g00600.t01	Wine grape	cytosol	59.74	43.56
VIT_07s0185g00130.t01	Wine grape	cytosol	51.55	41.07
Solyc05g013750.2.1	Tomato	nucleus	54.17	37.92
PGSC0003DMT400030617	Potato	nucleus	54.17	37.87
KRH51034	Soybean	cytosol	9.33	33.73
KRH01585	Soybean	nucleus	45.01	32.35
KRH02116	Soybean	cytosol	9.49	31.87
KRH70517	Soybean	nucleus	43.37	31.62
Os05t0115800-01	Rice	cytosol, plasma membrane	20.95	27.47
KRH73311	Soybean	cytosol	10.8	24.35
KRH14828	Soybean	cytosol	10.8	24.35
KRH41072	Soybean	cytosol	11.46	7.61
KRH59756	Soybean	cytosol	11.46	7.59
KRH63849	Soybean	cytosol	10.97	7.28
KRH54116	Soybean	cytosol	10.64	6.25

Protein Annotations

MapMan:18.4.23.2.2	Gene3D:3.40.20.10	Gene3D:3.90.190.10	EMBL:ACUP02010799	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:DUSP
InterPro:Dual-sp_phosphatase_cat-dom	EnsemblPlantsGene:GLYMA_18G013200	GO:GO:0003674	GO:GO:0003824	GO:GO:0004725	GO:GO:0005575
GO:GO:0006464	GO:GO:0006470	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0019538
GO:GO:0035335	InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029006	InterPro:IPR029021	UniProt:K7MPD0
EnsemblPlants:KRG97518	ProteinID:KRG97518	ProteinID:KRG97518.1	PFAM:PF00782	ScanProsite:PS00383	PFscan:PS50054
PFscan:PS50056	PANTHER:PTHR10159	PANTHER:PTHR10159:SF491	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	SUPFAM:SSF52799
SUPFAM:SSF55753	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom	InterPro:Tyr_Pase_AS	UniParc:UPI000295A8AB	SEG:seg

Description

hypothetical protein

Coordinates

chr18:+:929640..933069

Molecular Weight (calculated)

67326.0 Da

IEP (calculated)

5.179

GRAVY (calculated)

-0.408

Length

611 amino acids

Sequence
(BLAST)

001: MYALRYNKEC PSAGSDDLGV WPLPQTPRGS IRTYYSSQPT KDFLFKRDKL AFFDKECSRI AEHIYLGSDT VAKNHELLRQ NGITHMLNCV GFVCPEYFKG
101: DFVYKTLWLQ DSPTEDITSI LYDVFDYFED VREQGGRVLV HCCQGVSRST ALVIAYLMWR EGQSFEDAFQ FVKTARAVTN PNMGFACQLL QCQKRIHAMP
201: TSPNSVHKMY RMAPHSPYDP LHLVPKMVNQ PGARALDSRG GFIIHIPSAI YVWNGKHCNS VMSCNARTAA FQMIRYEGAK GPILTIHEGE EPPGFWIALS
301: GDSDKEEEVM VMEEPSEGME SAELVDSGTT GPRKVDAYDL DFEIFHKALA GGVVPPFSLS DTGLETCLPA REQGWARLRR KFASGLLTSP KLNCDADSDP
401: CNDHQPSVDV EVEKQDSADE PLSPSSIPPC GSPDSFECYP NREKGSPEAM DFSVHGVASS LPLSPPGTSN PFPCFISCSP KFNSKSPTLS PSSSDYASSF
501: TFSPSSTNWS DLSFLSPRQP LSSGLESAEP FNVKDSSFSK NSSLLHKEDV PSPLEEFSAN HTFGGVNSNL PMKGSFLSIA ECRGSHPPSL MLPPSASESS
601: HVPKNNLEDC N

Best Arabidopsis Sequence Match ( AT3G06110.2 )
(BLAST)

001: MEKVVDLFGV GEANSQKLLE GGKDLSEIQQ GLFIGSVAEA NNKDFLKSSN ITHVLTVAVA LAPPYPDDFV YKVIEVVDRS ETDLTVYFDE CYSFIDQAIQ
101: SGGGVLVHCF MGMSRSVTIV VAYLMKKHGM GFSKAMELVR SRRHQAYPNP GFISQLQQFE KSIQGNA

Arabidopsis Description

DSPTP1BDual specificity protein phosphatase 1B [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.