CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009183_P008	Maize	cytosol	95.04	95.15
Os01t0347000-01	Rice	plasma membrane	82.35	81.97
TraesCS7A01G533600.2	Wheat	cytosol	79.35	80.47
TraesCS7B01G450800.1	Wheat	cytosol	79.24	80.35
TraesCS7D01G521000.1	Wheat	cytosol	79.24	80.35
HORVU7Hr1G117420.1	Barley	vacuole	78.2	79.3
GSMUA_Achr9P31030_001	Banana	cytosol	62.4	61.48
GSMUA_Achr11P...	Banana	cytosol	59.98	59.63
PGSC0003DMT400036964	Potato	cytosol	58.13	55.02
VIT_17s0000g00360.t01	Wine grape	cytosol	58.71	54.67
Solyc03g118350.2.1	Tomato	cytosol	58.02	54.38
KRH63849	Soybean	cytosol	56.63	53.37
KRH41072	Soybean	cytosol	56.52	53.26
KRH59756	Soybean	cytosol	56.29	52.93
EES00653	Sorghum	cytosol	56.17	52.48
CDX88046	Canola	nucleus	51.79	51.49
CDX80384	Canola	nucleus	51.9	51.31
AT5G23720.1	Thale cress	nucleus	53.86	50.27
Bra009705.1-P	Field mustard	nucleus	53.17	49.41
PGSC0003DMT400036963	Potato	cytosol	19.61	45.58
KRH54116	Soybean	cytosol	54.56	45.48
EER93666	Sorghum	cytosol	6.23	28.27
EER89672	Sorghum	nucleus	5.88	18.68
EES07355	Sorghum	nucleus	5.19	16.73
OQU77254	Sorghum	cytosol	10.5	11.93

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.23.2.2	Gene3D:3.90.190.10	EntrezGene:8075328	InterPro:Actin-fragmin_kin_cat_dom
UniProt:C5XJV9	InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	EnsemblPlants:EES00724	ProteinID:EES00724	ProteinID:EES00724.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004725	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006470	GO:GO:0008138	GO:GO:0008150
GO:GO:0008152	GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0016043	GO:GO:0016301
GO:GO:0016310	GO:GO:0016311	GO:GO:0016740	GO:GO:0016787	GO:GO:0016791	GO:GO:0019538
GO:GO:0035335	GO:GO:0043622	InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029021	InterPro:Kinase-like_dom_sf
PFAM:PF00782	PFAM:PF09192	InterPro:PHS1	ScanProsite:PS00383	PFscan:PS50054	PFscan:PS50056
PANTHER:PTHR10159	PANTHER:PTHR10159:SF346	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	EnsemblPlantsGene:SORBI_3003G158000	SUPFAM:SSF52799
SUPFAM:SSF56112	unigene:Sbi.21063	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom	InterPro:Tyr_Pase_AS	UniParc:UPI0001A8454C
RefSeq:XP_002455604.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:17996176..18000974

Molecular Weight (calculated)

96741.3 Da

IEP (calculated)

6.355

GRAVY (calculated)

-0.399

Length

867 amino acids

Sequence
(BLAST)

001: MEEGTTESGS FSRSSSFGGF EEWVALVRKR NGKASSCGRL GLRSSASSEV LDLADPDSNV IDPDPCDQVP EGILWERLGR VSMMDIESSN FSWSSLTSLH
101: HTKHAATSTD PSEDDISRSF EVTVNSGGVV FIALFKAIEN VDLPSKETAA VIKIAPSRMA TQSERFGYEL AKWLGVRTPQ GRVIHSSSSE WQQIKDAVEN
201: ARHGSIAAGD ELEEMICAEM LEALELSRCL FLMNYVHGSP LLENVMPFES RQAAEKTAEA LGRVLILDLV LRNEDRLRCR PLGWRGNYAN LLVANREAYA
301: NLDTLDDVYD SAIIRYKPEI IRSPQKQKQR RAVSISGSIG SDVSDLILED SYASGGHEFS SFNIVAIDSG VPRRPPASKR AKDQESYPKL VELTLNNFDY
401: SSKLLFEVSF GKLGTPGHEE FDVSSDYSYN SPLSESDMVA TVHSFRGGFR SALRDLQRFH IFLVTLYQKL DGLLKIFFNL MYKCSNEYAR EDAGTSDSPL
501: CSVESQADSN DTDVPRNLRK PSRTLSRDNL DLSSPSCREN FISKHFKGNG DASRGLRLTM KLRDFNKYAK VDSELSKEIE QWNDMLRTEV VKLCQDNNFY
601: TGFFEGTDNS TAVDAYELKV RLEHILERIS LISDAASTER PSQITDYLYI GGALAARSTH TLKHLGITHI LCLCANEIGQ SESQKPDLFE YRNFSIKDDD
701: NADIGDLFQD GSDFIDYVDH LRGKVLVHCF EGKSRSATVV LAYLMLRKKC TLLEAWNMLK KVHRRAHPND GFAKVLLDLD KKLHGKISME WQHKRPAMKV
801: CPICGKNAGL SSSSLKLHLQ KAHKKISSGS VDSAMTLEIQ KAIEAIKAGW SGSDSPVHKS QSHIEGF

Best Arabidopsis Sequence Match ( AT5G23720.1 )
(BLAST)

001: MAEPEKKRDQ PFSQEKDEEK DLYLVHDEHE SPLPLTVTSR VLYMLGDIAS GPAYRFTQWL DLVRKRSATY GSSGFPHRLH RIDDMVTSAG ERNTDPKSPP
101: SRQSSEISLW ERLGKASTVD IDSSCFSWNM LSSLHHTEHS SSTDHSEEDQ SKPLEVTVNS GGVVFFALFN SSSSEDASRK EEAAVIKFAS SRMATQSERL
201: GYEFSKWLGV QIPQARVIHS CNPEWTLIKE ATEKAQAKAT SEGDEVGEMT CSELLEALEL SRCLLLMSYV HGCPMLESMS SFETEEKAER AAAALGRILV
301: LDLVIRNEDR LPCRQLRWRG NPANLLLTDR IVSSAKHHEC SFDEAFDSAI KRYHPKDYRS IQRERRASSV DSRSRLSISD QMLVSQASDF SDITESPRSY
401: DTGLMSPMSD RSVAADFHLV AIDSGVPRRP PAGKRASDQE IYPRLVELLL NSSQYSSNLL HEITEGSLGY PQAEDGEETS NVRSVVTPVV REFRNGFRAG
501: LRDLQEFHIF LVTLHQKLDV LLRAFFSMMD KTMCADFDRE DFAVPESPSH THGHEVNHYP SPSKDRVPSD NSSDHSESDM QKSVPRTPNS ENKEDGSSPK
601: SRESWHGRSG KGGESLSSQR LAAKLRDFHK FAKVDAESNK ELDQWNETLR NEVMKLCQEN GFNTGFFEGS DNNSCTDAYE LKVRLEHILE RISLISKAAN
701: TEKPSMIQEN LFIGGGLAAR SIYTLQHLGI THVLCLCANE IGQSDTQYPD LFEYQNFSIT DDEDSNIESI FQEALDFIKH GEETGGKILV HCFEGRSRSA
801: TVVLAYLMLQ KKLTLLEAWS KLRKVHRRAQ PNDGFARILI NLDKKCHGKV SMEWRQRKPT MKVCPVCGKN AGLSSSSLKL HLQKSHRKLS SGSVDSAMNM
901: EIQKALEALK LSTGRGSSAS SNSFQSHPG

Arabidopsis Description

PHS1Dual specificity protein phosphatase PHS1 [Source:UniProtKB/Swiss-Prot;Acc:Q75QN6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.