Factsheet for Solyc07g049410.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400001770	Potato	nucleus	91.29	92.34
Solyc12g005990.1.1	Tomato	nucleus	69.7	67.9
VIT_12s0059g01650.t01	Wine grape	nucleus	68.94	66.91
KRH73311	Soybean	cytosol	66.67	64.94
CDX93055	Canola	nucleus	59.47	64.61
KRH14828	Soybean	cytosol	65.91	64.21
CDY15058	Canola	nucleus	59.09	64.2
AT2G04550.1	Thale cress	nucleus	61.36	63.03
TraesCS7D01G224700.1	Wheat	cytosol	63.26	63.02
TraesCS7B01G129500.1	Wheat	cytosol	63.26	63.02
TraesCS7A01G223000.1	Wheat	cytosol	62.88	62.64
CDY00870	Canola	nucleus	57.58	62.55
Bra013201.1-P	Field mustard	nucleus	48.11	62.25
Bra015154.1-P	Field mustard	nucleus	60.98	62.16
CDY27864	Canola	nucleus	57.2	62.14
Zm00001d037412_P001	Maize	nucleus	63.64	61.09
EER89672	Sorghum	nucleus	62.5	60.44
Os06t0308100-01	Rice	cytosol	62.5	59.14
EES07355	Sorghum	nucleus	56.82	55.76
HORVU7Hr1G045710.4	Barley	cytosol	62.88	55.7
GSMUA_Achr9P19040_001	Banana	nucleus	57.95	55.64
Os02t0720300-01	Rice	nucleus	56.06	55.22
TraesCS6D01G263500.1	Wheat	cytosol	56.44	54.38
TraesCS6A01G283000.1	Wheat	cytosol	56.06	54.01
GSMUA_Achr7P16900_001	Banana	cytosol	58.33	50.83
Zm00001d017863_P001	Maize	cytosol	56.06	48.84
HORVU6Hr1G071120.1	Barley	plastid	55.68	46.23
Solyc01g080040.2.1	Tomato	cytosol	19.7	29.05
Solyc05g054700.2.1	Tomato	cytosol	26.52	7.91
Solyc05g013750.2.1	Tomato	nucleus	23.86	7.22
Solyc03g118350.2.1	Tomato	cytosol	18.56	5.3

Protein Annotations

MapMan:18.4.23.2.2	Gene3D:3.90.190.10	InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004725	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0006470	GO:GO:0007154	GO:GO:0007165	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0019538	GO:GO:0035335
GO:GO:0043407	InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029021	UniProt:K4CF44	PFAM:PF00782
ScanProsite:PS00383	PFscan:PS50054	PFscan:PS50056	PANTHER:PTHR10159	PANTHER:PTHR10159:SF329	InterPro:Prot-tyrosine_phosphatase-like
SMART:SM00195	SUPFAM:SSF52799	EnsemblPlantsGene:Solyc07g049410.2	EnsemblPlants:Solyc07g049410.2.1	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom
InterPro:Tyr_Pase_AS	UniParc:UPI000276B248	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7:-:59674869..59681464

Molecular Weight (calculated)

29708.1 Da

IEP (calculated)

6.501

GRAVY (calculated)

-0.439

Length

264 amino acids

Sequence
(BLAST)

001: MRKRERENPC GICGHYHKYE EGEPCGVCGH RMPTVSDMGS TIQVSAFPSE ILPEFLFLGS YDNASRAELL KSQGISRVLN TVPACQNLYK NSFTYHCLGD
101: EQDLQFDDAI QFLEQCERDR ARVLVHCMSG KSRSPAIVIA YLMKSRGWKL AQSYQWVKDR RPYVDLNQGV YHQLEAYEQK MFGSLENQPA FGMPVFSSPV
201: LPSLSFNYPK PSDSVQIPAF NFSGATSIFA RPDIGIPPQE FTFGAAHTSD IHLSSNQNPN SNMD

Best Arabidopsis Sequence Match ( AT2G04550.1 )
(BLAST)

001: MRKRERENPC SICGHYHKYE EGEVCGVCGH CMPVSSDTVA PQQVHVSAFP SEILPEFLYL GSYDNASRSE LLKTQGISRV LNTVPMCQNL YRNSFTYHGL
101: DNEKVLQFDD AIKFLDQCEK DKARVLVHCM SGKSRSPAVV VAYLMKRKGW RLAESHQWVK QRRPSTDISP EFYQQLQEFE QGIFGSEMMS AMNINDAPTF
201: GFGFPKIDNQ AQAPVFNNAP TSSIFSSPAS SIPPQEFTFG ATPPKPTTGG DIAMDGS

Arabidopsis Description

IBR5Protein-tyrosine-phosphatase IBR5 [Source:UniProtKB/Swiss-Prot;Acc:Q84JU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.