Factsheet for Bra015154.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003735.1-P
Bra008231.1-P
Bra015801.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G04550.1	Bra003735.1-P	AT1G75950.1	12795696
AT2G04550.1	Bra008231.1-P	AT1G75950.1	12795696
AT2G04550.1	Bra015801.1-P	AT1G75950.1	12795696

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27864	Canola	nucleus	93.05	99.18
CDY00870	Canola	nucleus	92.66	98.77
Bra013201.1-P	Field mustard	nucleus	67.57	85.78
AT2G04550.1	Thale cress	nucleus	83.01	83.66
PGSC0003DMT400036094	Potato	nucleus	64.86	61.76
VIT_12s0059g01650.t01	Wine grape	nucleus	64.09	61.03
Solyc07g049410.2.1	Tomato	nucleus	62.16	60.98
PGSC0003DMT400001770	Potato	nucleus	61.39	60.92
Solyc12g005990.1.1	Tomato	nucleus	63.32	60.52
KRH73311	Soybean	cytosol	62.93	60.15
KRH14828	Soybean	cytosol	62.55	59.78
TraesCS7B01G129500.1	Wheat	cytosol	61.0	59.62
TraesCS7D01G224700.1	Wheat	cytosol	60.62	59.25
TraesCS7A01G223000.1	Wheat	cytosol	60.62	59.25
EER89672	Sorghum	nucleus	60.62	57.51
Zm00001d037412_P001	Maize	nucleus	60.62	57.09
Os06t0308100-01	Rice	cytosol	61.0	56.63
GSMUA_Achr9P19040_001	Banana	nucleus	57.53	54.18
TraesCS6D01G263500.1	Wheat	cytosol	55.98	52.92
HORVU7Hr1G045710.4	Barley	cytosol	60.62	52.68
Os02t0720300-01	Rice	nucleus	54.44	52.61
TraesCS6A01G283000.1	Wheat	cytosol	55.6	52.55
EES07355	Sorghum	nucleus	54.44	52.42
GSMUA_Achr7P16900_001	Banana	cytosol	58.3	49.84
Zm00001d017863_P001	Maize	cytosol	52.9	45.21
HORVU6Hr1G071120.1	Barley	plastid	55.21	44.97
Bra020776.1-P	Field mustard	cytosol	18.92	27.22
Bra014966.1-P	Field mustard	cytosol	18.92	27.07
Bra028323.1-P	Field mustard	cytosol, mitochondrion	19.3	20.08
Bra014764.1-P	Field mustard	cytosol	20.85	7.59
Bra009705.1-P	Field mustard	nucleus	16.99	4.72

Protein Annotations

MapMan:18.4.23.2.2	Gene3D:3.90.190.10	EnsemblPlantsGene:Bra015154	EnsemblPlants:Bra015154.1	EnsemblPlants:Bra015154.1-P	InterPro:DUSP
InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004725	GO:GO:0006464	GO:GO:0006470
GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787
GO:GO:0016791	GO:GO:0019538	GO:GO:0035335	InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029021
UniProt:M4DF82	PFAM:PF00782	ScanProsite:PS00383	PFscan:PS50054	PFscan:PS50056	PANTHER:PTHR10159
PANTHER:PTHR10159:SF329	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	SUPFAM:SSF52799	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom
InterPro:Tyr_Pase_AS	UniParc:UPI00025412AB	SEG:seg	:	:	:

Description

AT2G04550 (E=9e-115) IBR5 | IBR5 (INDOLE-3-BUTYRIC ACID RESPONSE 5); MAP kinase phosphatase/ protein tyrosine/serine/threonine phosphatase

Coordinates

chrA07:-:3016634..3018221

Molecular Weight (calculated)

28953.4 Da

IEP (calculated)

7.734

GRAVY (calculated)

-0.458

Length

259 amino acids

Sequence
(BLAST)

001: MRKRERENPC SLCGHYHKYE EGEVCGICGH RKPDSSDVAA PQVQLSAFPT EILPEFLYLG SYDNASRSEV LKTQGISRVL NTVPMCQNLY RNSFTYHCLS
101: DEKVLQFDDA IQFLDQCEKD KARVLVHCMS GKSRSPAVVV AYLMKRKGWR LAESHQWVKQ RRPTTDITLE FYQQLEAFER TILGSREGMM AAMNINDPPT
201: FGFGFPKVNN NSQAQVPMFN NTSASSIFSS PASSIPQGFT FGAAPPKPTT GDDTIMGGS

Best Arabidopsis Sequence Match ( AT2G04550.1 )
(BLAST)

001: MRKRERENPC SICGHYHKYE EGEVCGVCGH CMPVSSDTVA PQQVHVSAFP SEILPEFLYL GSYDNASRSE LLKTQGISRV LNTVPMCQNL YRNSFTYHGL
101: DNEKVLQFDD AIKFLDQCEK DKARVLVHCM SGKSRSPAVV VAYLMKRKGW RLAESHQWVK QRRPSTDISP EFYQQLQEFE QGIFGSEMMS AMNINDAPTF
201: GFGFPKIDNQ AQAPVFNNAP TSSIFSSPAS SIPPQEFTFG ATPPKPTTGG DIAMDGS

Arabidopsis Description

IBR5Protein-tyrosine-phosphatase IBR5 [Source:UniProtKB/Swiss-Prot;Acc:Q84JU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.