Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93055 | Canola | nucleus | 81.32 | 86.01 |
| CDY15058 | Canola | nucleus | 80.54 | 85.19 |
| Bra013201.1-P | Field mustard | nucleus | 66.54 | 83.82 |
| Bra015154.1-P | Field mustard | nucleus | 83.66 | 83.01 |
| CDY00870 | Canola | nucleus | 78.21 | 82.72 |
| CDY27864 | Canola | nucleus | 77.82 | 82.3 |
| KRH73311 | Soybean | cytosol | 66.54 | 63.1 |
| VIT_12s0059g01650.t01 | Wine grape | nucleus | 66.54 | 62.87 |
| PGSC0003DMT400036094 | Potato | nucleus | 66.54 | 62.87 |
| KRH14828 | Soybean | cytosol | 65.76 | 62.36 |
| Solyc12g005990.1.1 | Tomato | nucleus | 65.76 | 62.36 |
| PGSC0003DMT400001770 | Potato | nucleus | 63.03 | 62.07 |
| Solyc07g049410.2.1 | Tomato | nucleus | 63.03 | 61.36 |
| TraesCS7B01G129500.1 | Wheat | cytosol | 61.48 | 59.62 |
| TraesCS7A01G223000.1 | Wheat | cytosol | 61.09 | 59.25 |
| TraesCS7D01G224700.1 | Wheat | cytosol | 61.09 | 59.25 |
| EER89672 | Sorghum | nucleus | 61.48 | 57.88 |
| Zm00001d037412_P001 | Maize | nucleus | 61.87 | 57.82 |
| Os06t0308100-01 | Rice | cytosol | 61.87 | 56.99 |
| GSMUA_Achr9P19040_001 | Banana | nucleus | 58.75 | 54.91 |
| Os02t0720300-01 | Rice | nucleus | 56.03 | 53.73 |
| HORVU7Hr1G045710.4 | Barley | cytosol | 61.09 | 52.68 |
| EES07355 | Sorghum | nucleus | 54.86 | 52.42 |
| TraesCS6D01G263500.1 | Wheat | cytosol | 55.64 | 52.19 |
| TraesCS6A01G283000.1 | Wheat | cytosol | 55.25 | 51.82 |
| GSMUA_Achr7P16900_001 | Banana | cytosol | 61.09 | 51.82 |
| Zm00001d017863_P001 | Maize | cytosol | 53.31 | 45.21 |
| HORVU6Hr1G071120.1 | Barley | plastid | 54.86 | 44.34 |
| AT3G06110.2 | Thale cress | cytosol | 19.07 | 29.34 |
| AT3G23610.3 | Thale cress | cytosol, plastid | 20.23 | 22.81 |
| AT5G23720.1 | Thale cress | nucleus | 17.51 | 4.84 |
Protein Annotations
| MapMan:18.4.23.2.2 | Gene3D:3.90.190.10 | EntrezGene:814997 | UniProt:A0A178VVJ8 | ProteinID:AAD25825.1 | ProteinID:AEC05845.1 |
| ProteinID:AEC05846.1 | ArrayExpress:AT2G04550 | EnsemblPlantsGene:AT2G04550 | RefSeq:AT2G04550 | TAIR:AT2G04550 | RefSeq:AT2G04550-TAIR-G |
| EnsemblPlants:AT2G04550.1 | TAIR:AT2G04550.1 | EMBL:AY337455 | EMBL:BT004283 | EMBL:BT005609 | InterPro:DUSP |
| InterPro:Dual-sp_phosphatase_cat-dom | GO:GO:0000188 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004725 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 |
| GO:GO:0006470 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008138 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009734 | GO:GO:0009737 | GO:GO:0009738 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0016311 | GO:GO:0016787 | GO:GO:0016791 | GO:GO:0019538 |
| GO:GO:0033549 | GO:GO:0035335 | GO:GO:0035556 | GO:GO:0040007 | GO:GO:0043407 | GO:GO:0046620 |
| GO:GO:0061388 | Symbol:IBR5 | InterPro:IPR000387 | InterPro:IPR020422 | InterPro:IPR029021 | RefSeq:NP_178534.2 |
| RefSeq:NP_973418.2 | ProteinID:OAP10417.1 | PFAM:PF00782 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00383 | PFscan:PS50054 |
| PFscan:PS50056 | PANTHER:PTHR10159 | PANTHER:PTHR10159:SF329 | InterPro:Prot-tyrosine_phosphatase-like | UniProt:Q84JU4 | SMART:SM00195 |
| SUPFAM:SSF52799 | InterPro:TYR_PHOSPHATASE_DUAL_dom | InterPro:TYR_PHOSPHATASE_dom | InterPro:Tyr_Pase_AS | UniParc:UPI000000C31C | SEG:seg |
Description
IBR5Protein-tyrosine-phosphatase IBR5 [Source:UniProtKB/Swiss-Prot;Acc:Q84JU4]
Coordinates
chr2:+:1588193..1590166
Molecular Weight (calculated)
28692.0 Da
IEP (calculated)
6.614
GRAVY (calculated)
-0.449
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKRERENPC SICGHYHKYE EGEVCGVCGH CMPVSSDTVA PQQVHVSAFP SEILPEFLYL GSYDNASRSE LLKTQGISRV LNTVPMCQNL YRNSFTYHGL
101: DNEKVLQFDD AIKFLDQCEK DKARVLVHCM SGKSRSPAVV VAYLMKRKGW RLAESHQWVK QRRPSTDISP EFYQQLQEFE QGIFGSEMMS AMNINDAPTF
201: GFGFPKIDNQ AQAPVFNNAP TSSIFSSPAS SIPPQEFTFG ATPPKPTTGG DIAMDGS
101: DNEKVLQFDD AIKFLDQCEK DKARVLVHCM SGKSRSPAVV VAYLMKRKGW RLAESHQWVK QRRPSTDISP EFYQQLQEFE QGIFGSEMMS AMNINDAPTF
201: GFGFPKIDNQ AQAPVFNNAP TSSIFSSPAS SIPPQEFTFG ATPPKPTTGG DIAMDGS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.