Factsheet for TraesCS6D01G263500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G283000.1	Wheat	cytosol	98.54	98.54
HORVU6Hr1G071120.1	Barley	plastid	97.81	84.28
Os02t0720300-01	Rice	nucleus	72.63	74.25
TraesCS7D01G224700.1	Wheat	cytosol	69.34	71.7
EES07355	Sorghum	nucleus	69.71	71.0
Zm00001d017863_P001	Maize	cytosol	70.07	63.37
KRH73311	Soybean	cytosol	57.3	57.93
KRH14828	Soybean	cytosol	56.57	57.2
PGSC0003DMT400036094	Potato	nucleus	56.57	56.99
GSMUA_Achr9P19040_001	Banana	nucleus	56.93	56.73
VIT_12s0059g01650.t01	Wine grape	nucleus	56.2	56.62
Solyc07g049410.2.1	Tomato	nucleus	54.38	56.44
CDX93055	Canola	nucleus	50.0	56.38
PGSC0003DMT400001770	Potato	nucleus	53.65	56.32
Bra015154.1-P	Field mustard	nucleus	52.92	55.98
CDY15058	Canola	nucleus	49.63	55.97
CDY27864	Canola	nucleus	49.63	55.97
AT2G04550.1	Thale cress	nucleus	52.19	55.64
CDY00870	Canola	nucleus	49.27	55.56
Solyc12g005990.1.1	Tomato	nucleus	54.74	55.35
Bra013201.1-P	Field mustard	nucleus	40.51	54.41
GSMUA_Achr7P16900_001	Banana	cytosol	56.93	51.49
TraesCS3D01G157700.3	Wheat	cytosol	17.15	23.86
TraesCS1D01G046000.2	Wheat	cytosol	18.98	6.92
TraesCS1D01G265200.5	Wheat	cytosol	19.34	5.72
TraesCS7D01G521000.1	Wheat	cytosol	16.79	5.38

Protein Annotations

MapMan:18.4.23.2.2	Gene3D:3.90.190.10	InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004725	GO:GO:0006464	GO:GO:0006470	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0019538	InterPro:IPR000387
InterPro:IPR020422	InterPro:IPR029021	PFAM:PF00782	ScanProsite:PS00383	PFscan:PS50054	PFscan:PS50056
PANTHER:PTHR10159	PANTHER:PTHR10159:SF331	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	SUPFAM:SSF52799	InterPro:TYR_PHOSPHATASE_DUAL_dom
InterPro:TYR_PHOSPHATASE_dom	EnsemblPlantsGene:TraesCS6D01G263500	EnsemblPlants:TraesCS6D01G263500.1	InterPro:Tyr_Pase_AS	TIGR:cd00127	SEG:seg

Description

No Description!

Coordinates

chr6D:+:372358353..372362481

Molecular Weight (calculated)

29604.8 Da

IEP (calculated)

6.608

GRAVY (calculated)

-0.317

Length

274 amino acids

Sequence
(BLAST)

001: MRKRERENPC GVCGHYHKCE EGEICGVCGH RPAAADAVAP ARVDSAFPSE VLKGFLFLGS YDNASRSEVL KTLNITHILN TVPDCHNLYR NSFTYHCLQD
101: DKTLDFDGAT QFLEQCERGA SRVLVHCMSG KNRSAAVVTA FLMKSRGWRL APSLQWVKDR RPQVQITEAS QCQLVEYEQK LFGPSAGSPA QTTVLTESFP
201: SLGFGFPQPS GDIQVPAFNQ TPVPSIFERA GPNNVPSNFT FGADGSMGVG VGPAAGINNG AVTPASTDNQ MDSS

Best Arabidopsis Sequence Match ( AT2G04550.1 )
(BLAST)

001: MRKRERENPC SICGHYHKYE EGEVCGVCGH CMPVSSDTVA PQQVHVSAFP SEILPEFLYL GSYDNASRSE LLKTQGISRV LNTVPMCQNL YRNSFTYHGL
101: DNEKVLQFDD AIKFLDQCEK DKARVLVHCM SGKSRSPAVV VAYLMKRKGW RLAESHQWVK QRRPSTDISP EFYQQLQEFE QGIFGSEMMS AMNINDAPTF
201: GFGFPKIDNQ AQAPVFNNAP TSSIFSSPAS SIPPQEFTFG ATPPKPTTGG DIAMDGS

Arabidopsis Description

IBR5Protein-tyrosine-phosphatase IBR5 [Source:UniProtKB/Swiss-Prot;Acc:Q84JU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.