Factsheet for HORVU6Hr1G071120.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G263500.1	Wheat	cytosol	84.28	97.81
TraesCS6A01G283000.1	Wheat	cytosol	83.65	97.08
Os02t0720300-01	Rice	nucleus	62.26	73.88
EES07355	Sorghum	nucleus	61.01	72.12
HORVU7Hr1G045710.4	Barley	cytosol	61.32	65.44
Zm00001d017863_P001	Maize	cytosol	61.32	64.36
KRH73311	Soybean	cytosol	48.74	57.2
KRH14828	Soybean	cytosol	48.11	56.46
GSMUA_Achr9P19040_001	Banana	nucleus	48.74	56.36
PGSC0003DMT400036094	Potato	nucleus	48.11	56.25
VIT_12s0059g01650.t01	Wine grape	nucleus	47.8	55.88
Solyc07g049410.2.1	Tomato	nucleus	46.23	55.68
PGSC0003DMT400001770	Potato	nucleus	45.6	55.56
CDX93055	Canola	nucleus	42.45	55.56
Bra015154.1-P	Field mustard	nucleus	44.97	55.21
CDY27864	Canola	nucleus	42.14	55.14
CDY15058	Canola	nucleus	42.14	55.14
AT2G04550.1	Thale cress	nucleus	44.34	54.86
CDY00870	Canola	nucleus	41.82	54.73
Solyc12g005990.1.1	Tomato	nucleus	46.54	54.61
Bra013201.1-P	Field mustard	nucleus	34.28	53.43
GSMUA_Achr7P16900_001	Banana	cytosol	48.74	51.16
HORVU3Hr1G030420.6	Barley	cytosol, peroxisome	14.47	21.8
HORVU1Hr1G065070.6	Barley	cytosol	18.24	6.37
HORVU1Hr1G008230.4	Barley	plastid	17.3	6.29
HORVU7Hr1G117420.1	Barley	vacuole	16.35	6.08
HORVU2Hr1G100930.1	Barley	mitochondrion	1.57	4.2
HORVU3Hr1G030440.1	Barley	cytosol, mitochondrion, nucleus	0.63	3.77

Protein Annotations

MapMan:18.4.23.2.2	Gene3D:3.90.190.10	UniProt:A0A287ULF1	InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004725	GO:GO:0006464	GO:GO:0006470	GO:GO:0008138	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0019538
GO:GO:0035335	EnsemblPlantsGene:HORVU6Hr1G071120	EnsemblPlants:HORVU6Hr1G071120.1	InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029021
PFAM:PF00782	ScanProsite:PS00383	PFscan:PS50054	PFscan:PS50056	PANTHER:PTHR10159	PANTHER:PTHR10159:SF331
InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	SUPFAM:SSF52799	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom	InterPro:Tyr_Pase_AS
UniParc:UPI000B4862A2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:495583768..495588451

Molecular Weight (calculated)

34533.5 Da

IEP (calculated)

8.110

GRAVY (calculated)

-0.487

Length

318 amino acids

Sequence
(BLAST)

001: LRFASSQVPT RANRAPTPPR RSHHSLPPAD RAARRGAAAD GRKEMRKRER ENPCGVCGHY HKCEEGEICG VCGHRPAAAD AVAPARVDSA FPSEVLKGFL
101: FLGSYDNASR SEVLRTLNIT HILNTVPDCH NLYRNSFTYH CLQDDKTLDF DGATQYLEQC EREQSRVLVH CMSGKNRSAA VVTAFLMKSR GWRLAPSLQW
201: VKDRRPQVQI TEASQCQLVE YEQKLFGPSA GSPAQTTVLT ESFPSLGFGF PQPSGDIQVP AFNQTPVPSI FERAGPNNVP SNFTFGAEGS MGAGVGPAAG
301: INNGAVTPAS TDNQMDSS

Best Arabidopsis Sequence Match ( AT2G04550.1 )
(BLAST)

001: MRKRERENPC SICGHYHKYE EGEVCGVCGH CMPVSSDTVA PQQVHVSAFP SEILPEFLYL GSYDNASRSE LLKTQGISRV LNTVPMCQNL YRNSFTYHGL
101: DNEKVLQFDD AIKFLDQCEK DKARVLVHCM SGKSRSPAVV VAYLMKRKGW RLAESHQWVK QRRPSTDISP EFYQQLQEFE QGIFGSEMMS AMNINDAPTF
201: GFGFPKIDNQ AQAPVFNNAP TSSIFSSPAS SIPPQEFTFG ATPPKPTTGG DIAMDGS

Arabidopsis Description

IBR5Protein-tyrosine-phosphatase IBR5 [Source:UniProtKB/Swiss-Prot;Acc:Q84JU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.