Factsheet for GSMUA_Achr7P16900_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P19040_001	Banana	nucleus	67.66	74.55
VIT_12s0059g01650.t01	Wine grape	nucleus	58.42	65.07
EER89672	Sorghum	nucleus	56.11	62.27
Zm00001d037412_P001	Maize	nucleus	56.44	62.18
AT2G04550.1	Thale cress	nucleus	51.82	61.09
TraesCS7D01G224700.1	Wheat	cytosol	53.14	60.75
TraesCS7B01G129500.1	Wheat	cytosol	53.14	60.75
TraesCS7A01G223000.1	Wheat	cytosol	53.14	60.75
Solyc12g005990.1.1	Tomato	nucleus	54.13	60.52
CDY00870	Canola	nucleus	48.18	60.08
CDX93055	Canola	nucleus	48.18	60.08
CDY15058	Canola	nucleus	47.85	59.67
CDY27864	Canola	nucleus	47.85	59.67
Os06t0308100-01	Rice	cytosol	54.79	59.5
KRH73311	Soybean	cytosol	53.14	59.41
PGSC0003DMT400036094	Potato	nucleus	53.14	59.19
PGSC0003DMT400001770	Potato	nucleus	50.83	59.0
KRH14828	Soybean	cytosol	52.48	58.67
EES07355	Sorghum	nucleus	51.82	58.36
Solyc07g049410.2.1	Tomato	nucleus	50.83	58.33
Bra015154.1-P	Field mustard	nucleus	49.84	58.3
Bra013201.1-P	Field mustard	nucleus	38.94	57.84
Os02t0720300-01	Rice	nucleus	50.49	57.09
TraesCS6D01G263500.1	Wheat	cytosol	51.49	56.93
TraesCS6A01G283000.1	Wheat	cytosol	50.83	56.2
HORVU7Hr1G045710.4	Barley	cytosol	53.8	54.7
Zm00001d017863_P001	Maize	cytosol	51.49	51.49
HORVU6Hr1G071120.1	Barley	plastid	51.16	48.74
GSMUA_Achr7P21200_001	Banana	cytosol	15.18	25.84
GSMUA_Achr7P21120_001	Banana	cytosol	14.52	24.44
GSMUA_Achr4P00410_001	Banana	mitochondrion	14.85	23.44
GSMUA_Achr6P12120_001	Banana	cytosol	19.47	8.35
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, nucleus	20.13	7.38
GSMUA_Achr10P...	Banana	cytosol	15.51	7.05
GSMUA_Achr6P23510_001	Banana	nucleus	15.84	6.59
GSMUA_Achr9P31030_001	Banana	cytosol	16.83	5.8
GSMUA_Achr11P...	Banana	cytosol	16.17	5.62
GSMUA_Achr9P16510_001	Banana	cytosol	15.84	5.23
GSMUA_Achr3P08210_001	Banana	nucleus	15.18	5.02

Protein Annotations

MapMan:18.4.23.2.2	Gene3D:3.90.190.10	InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004725	GO:GO:0006464	GO:GO:0006470	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0019538	GO:GO:0035335
EnsemblPlantsGene:GSMUA_Achr7G16900_001	EnsemblPlants:GSMUA_Achr7P16900_001	EnsemblPlants:GSMUA_Achr7T16900_001	InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029021
UniProt:M0TI77	PFAM:PF00782	ScanProsite:PS00383	PFscan:PS50054	PFscan:PS50056	PANTHER:PTHR10159
PANTHER:PTHR10159:SF329	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	SUPFAM:SSF52799	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom
InterPro:Tyr_Pase_AS	UniParc:UPI000294AF38	SEG:seg	:	:	:

Description

Protein-tyrosine-phosphatase IBR5 [Source:GMGC_GENE;Acc:GSMUA_Achr7G16900_001]

Coordinates

chr7:+:17750905..17761723

Molecular Weight (calculated)

34444.4 Da

IEP (calculated)

7.373

GRAVY (calculated)

-0.189

Length

303 amino acids

Sequence
(BLAST)

001: MRKRERENPC DVCGHYHKYE EGEVCGVCGH RVPAAFERPI QPASAFPSEI LTDFLYLGSY DNASRGEILK TLRITHILNT VPACQNLYKN SFTYHCLQDD
101: KVLQFDDAIQ FLEQCDKEKA RVLVHCMLGK NRSPAIVMAY LMKCKGWRFA QSFQWVRDRR PMVELSPAVQ QQLLDYEQKI FGSGETTAMQ PVLPPESLPS
201: FGFGLPVNTS PAPVFNQPTT ASVFDRSVPS TGSEFVFGAG RNIEQRVMEN NAFVVVPPTG GEAPMDTYVE TTFLFSSFTF CFFFFKKKKR VVECFLFSSL
301: HIF

Best Arabidopsis Sequence Match ( AT2G04550.1 )
(BLAST)

001: MRKRERENPC SICGHYHKYE EGEVCGVCGH CMPVSSDTVA PQQVHVSAFP SEILPEFLYL GSYDNASRSE LLKTQGISRV LNTVPMCQNL YRNSFTYHGL
101: DNEKVLQFDD AIKFLDQCEK DKARVLVHCM SGKSRSPAVV VAYLMKRKGW RLAESHQWVK QRRPSTDISP EFYQQLQEFE QGIFGSEMMS AMNINDAPTF
201: GFGFPKIDNQ AQAPVFNNAP TSSIFSSPAS SIPPQEFTFG ATPPKPTTGG DIAMDGS

Arabidopsis Description

IBR5Protein-tyrosine-phosphatase IBR5 [Source:UniProtKB/Swiss-Prot;Acc:Q84JU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.