Factsheet for TraesCS7B01G129500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G223000.1	Wheat	cytosol	98.87	98.87
TraesCS7D01G224700.1	Wheat	cytosol	97.74	97.74
HORVU7Hr1G045710.4	Barley	cytosol	96.23	85.57
Os06t0308100-01	Rice	cytosol	88.3	83.87
EER89672	Sorghum	nucleus	84.91	82.42
Zm00001d037412_P001	Maize	nucleus	83.4	80.36
Solyc07g049410.2.1	Tomato	nucleus	63.02	63.26
CDX93055	Canola	nucleus	57.36	62.55
CDY15058	Canola	nucleus	56.98	62.14
CDY00870	Canola	nucleus	56.98	62.14
CDY27864	Canola	nucleus	56.6	61.73
PGSC0003DMT400001770	Potato	nucleus	60.75	61.69
AT2G04550.1	Thale cress	nucleus	59.62	61.48
Bra015154.1-P	Field mustard	nucleus	59.62	61.0
KRH73311	Soybean	cytosol	61.89	60.52
Bra013201.1-P	Field mustard	nucleus	46.42	60.29
KRH14828	Soybean	cytosol	61.51	60.15
VIT_12s0059g01650.t01	Wine grape	nucleus	61.13	59.56
PGSC0003DMT400036094	Potato	nucleus	60.75	59.19
Solyc12g005990.1.1	Tomato	nucleus	59.25	57.93
GSMUA_Achr9P19040_001	Banana	nucleus	60.0	57.82
GSMUA_Achr7P16900_001	Banana	cytosol	60.75	53.14
TraesCS3B01G176900.1	Wheat	cytosol	16.98	22.84
TraesCS1B01G058600.2	Wheat	cytosol	19.25	6.79
TraesCS7B01G450800.1	Wheat	cytosol	17.74	5.5
TraesCS1B01G275700.3	Wheat	cytosol	19.25	5.5

Protein Annotations

MapMan:18.4.23.2.2	Gene3D:3.90.190.10	InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004725	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0006470	GO:GO:0007154	GO:GO:0007165	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152
GO:GO:0009719	GO:GO:0009733	GO:GO:0009737	GO:GO:0009987	GO:GO:0016043	GO:GO:0016049
GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0019538	GO:GO:0033549	GO:GO:0040007
GO:GO:0043407	GO:GO:0046620	GO:GO:0061388	InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029021
PFAM:PF00782	ScanProsite:PS00383	PFscan:PS50054	PFscan:PS50056	PANTHER:PTHR10159	PANTHER:PTHR10159:SF329
InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	SUPFAM:SSF52799	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom	EnsemblPlantsGene:TraesCS7B01G129500
EnsemblPlants:TraesCS7B01G129500.1	InterPro:Tyr_Pase_AS	TIGR:cd00127	SEG:seg	:	:

Description

No Description!

Coordinates

chr7B:-:154810319..154819232

Molecular Weight (calculated)

29391.8 Da

IEP (calculated)

7.051

GRAVY (calculated)

-0.362

Length

265 amino acids

Sequence
(BLAST)

001: MRKRERENPC GICGHYHKYE EGEPCGVCGH RPPALGPAGA AASPRQESAF PSEILKDFLF LGSYDNASRS ELLKTIGISH ILNTVPLCQN LYRNSFTYHC
101: LQDDKTLQFD DAIQFLEQCE RDKARVLVHC MSGKSRSAAF VVAFLMKSRG WRLAQCFQWV KERRPQVQLA DAAQQQLIEF EQKLFSSNVA PTDSFPSLGF
201: GFPKPSGDVQ VPIFNQQAPG SIFERVSPNN IPSNFTFGAT EAKLPDGSNF GVVNLAGTDS MMDSS

Best Arabidopsis Sequence Match ( AT2G04550.1 )
(BLAST)

001: MRKRERENPC SICGHYHKYE EGEVCGVCGH CMPVSSDTVA PQQVHVSAFP SEILPEFLYL GSYDNASRSE LLKTQGISRV LNTVPMCQNL YRNSFTYHGL
101: DNEKVLQFDD AIKFLDQCEK DKARVLVHCM SGKSRSPAVV VAYLMKRKGW RLAESHQWVK QRRPSTDISP EFYQQLQEFE QGIFGSEMMS AMNINDAPTF
201: GFGFPKIDNQ AQAPVFNNAP TSSIFSSPAS SIPPQEFTFG ATPPKPTTGG DIAMDGS

Arabidopsis Description

IBR5Protein-tyrosine-phosphatase IBR5 [Source:UniProtKB/Swiss-Prot;Acc:Q84JU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.