Factsheet for GSMUA_Achr7P13230_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 1
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G022940.3	Barley	plastid	47.26	41.57
Zm00001d039635_P001	Maize	nucleus	46.58	39.77
TraesCS3B01G142600.1	Wheat	nucleus	49.32	39.56
TraesCS3D01G125100.1	Wheat	nucleus	47.95	39.33
PGSC0003DMT400091592	Potato	cytosol, nucleus, plastid	47.26	37.91
TraesCS3A01G123500.1	Wheat	cytosol, nucleus, plastid	47.95	37.84
Solyc10g076390.1.1	Tomato	cytosol, nucleus, plastid	46.58	37.78
OQU86218	Sorghum	nucleus	48.63	37.37
Os01t0176900-00	Rice	cytosol	47.95	23.03
GSMUA_Achr4P31020_001	Banana	nucleus	34.93	19.69
GSMUA_Achr2P06600_001	Banana	nucleus	33.56	18.28
GSMUA_Achr10P...	Banana	nucleus	34.93	18.15
GSMUA_Achr8P27730_001	Banana	nucleus	33.56	17.88
GSMUA_Achr9P05670_001	Banana	nucleus	36.3	17.43
GSMUA_Achr7P26010_001	Banana	nucleus	34.25	17.36
GSMUA_Achr2P15550_001	Banana	mitochondrion, nucleus	34.93	16.67
GSMUA_Achr3P29980_001	Banana	nucleus	33.56	16.39
GSMUA_Achr8P31150_001	Banana	nucleus	32.88	16.27

Protein Annotations

MapMan:11.3.2.4	MapMan:15.5.39	InterPro:BES1_N	InterPro:BZR	ncoils:Coil	GO:GO:0003674
GO:GO:0003700	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009742	GO:GO:0009987
EnsemblPlantsGene:GSMUA_Achr7G13230_001	EnsemblPlants:GSMUA_Achr7P13230_001	EnsemblPlants:GSMUA_Achr7T13230_001	UniProt:M0TH60	PFAM:PF05687	PANTHER:PTHR31506
UniParc:UPI000294EF09	SEG:seg	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G13230_001]

Coordinates

chr7:-:10624598..10625038

Molecular Weight (calculated)

17273.8 Da

IEP (calculated)

11.543

GRAVY (calculated)

-1.123

Length

146 amino acids

Sequence
(BLAST)

001: MLLSCPQFHV SQRQSLSSLH DTQRRPRRAQ VVEEKKRMEE AMRVAKKSGC IKTTTGPWTV RRRRRDGVVK TSDRWPTPRE RENNRLREQR RRRVAARIYA
101: GLRAHGNYQL PKHADQNDVL KALCEEAGWH VEEDGTIYRK VRIHLP

Best Arabidopsis Sequence Match ( AT1G19350.3 )
(BLAST)

001: MKRFFYNSSE EERKKKAYSS KKMTSDGATS TSAAAAAAAM ATRRKPSWRE RENNRRRERR RRAVAAKIYT GLRAQGNYNL PKHCDNNEVL KALCSEAGWV
101: VEEDGTTYRK GHKPLPGDMA GSSSRATPYS SHNQSPLSST FDSPILSYQV SPSSSSFPSP SRVGDPHNIS TIFPFLRNGG IPSSLPPLRI SNSAPVTPPV
201: SSPTSRNPKP LPTWESFTKQ SMSMAAKQSM TSLNYPFYAV SAPASPTHHR QFHAPATIPE CDESDSSTVD SGHWISFQKF AQQQPFSASM VPTSPTFNLV
301: KPAPQQLSPN TAAIQEIGQS SEFKFENSQV KPWEGERIHD VAMEDLELTL GNGKAHS

Arabidopsis Description

BES1Brassinosteroid signaling positive regulator (BZR1) family protein [Source:UniProtKB/TrEMBL;Acc:F4HP45]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.