Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- cytosol 1
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3D01G125100.1 | Wheat | nucleus | 86.49 | 89.89 |
TraesCS3B01G142600.1 | Wheat | nucleus | 87.57 | 89.01 |
HORVU3Hr1G022940.3 | Barley | plastid | 75.68 | 84.34 |
Zm00001d039635_P001 | Maize | nucleus | 61.08 | 66.08 |
OQU86218 | Sorghum | nucleus | 64.32 | 62.63 |
GSMUA_Achr7P13230_001 | Banana | nucleus, plastid | 37.84 | 47.95 |
Os01t0176900-00 | Rice | cytosol | 56.22 | 34.21 |
Solyc10g076390.1.1 | Tomato | cytosol, nucleus, plastid | 31.89 | 32.78 |
PGSC0003DMT400091592 | Potato | cytosol, nucleus, plastid | 31.35 | 31.87 |
TraesCS3A01G139000.1 | Wheat | nucleus | 29.19 | 15.17 |
TraesCS6A01G338000.1 | Wheat | nucleus | 27.57 | 14.7 |
TraesCS7A01G354800.1 | Wheat | nucleus | 28.11 | 14.48 |
TraesCS2A01G187800.1 | Wheat | nucleus | 24.32 | 14.38 |
Protein Annotations
EnsemblPlants:TraesCS3A01G123500.1 | EnsemblPlantsGene:TraesCS3A01G123500 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006351 |
GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 |
GO:GO:0009742 | GO:GO:0009987 | InterPro:BES1_N | InterPro:BZR | PANTHER:PTHR31506 | PANTHER:PTHR31506:SF3 |
PFAM:PF05687 | SEG:seg | MapMan:11.3.2.4 | MapMan:15.5.39 | : | : |
Description
No Description!
Coordinates
chr3A:+:99587987..99588641
Molecular Weight (calculated)
19969.6 Da
IEP (calculated)
9.305
GRAVY (calculated)
-0.482
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGVAKSVVA PMEVAAGAVG EEAMAVAVAA GRRGCIRSTR GPWTVRRQAR GGAVKTSLRH PTPRERENNR QRERRRRQVA TRIYASLRAN AGYALPKHAD
101: QNDVLRALCA EAGYLVDDEG NVTRCHEVST DFGASCSSGH LQPSSHSHSV ATEATAGGIH QALLEPEAEP KHKISLELTL SFSYM
101: QNDVLRALCA EAGYLVDDEG NVTRCHEVST DFGASCSSGH LQPSSHSHSV ATEATAGGIH QALLEPEAEP KHKISLELTL SFSYM
001: MTASGGGSTA ATGRMPTWKE RENNKKRERR RRAIAAKIFT GLRSQGNYKL PKHCDNNEVL KALCLEAGWI VHEDGTTYRK GSRPTETTVP CSSIQLSPQS
101: SAFQSPIPSY QASPSSSSYP SPTRFDPNQS STYLIPYLQN LASSGNLAPL RISNSAPVTP PISSPRRSNP RLPRWQSSNF PVSAPSSPTR RLHHYTSIPE
201: CDESDVSTVD SCRWGNFQSV NVSQTCPPSP TFNLVGKSVS SVGVDVSVKP WEGEKIHDVG IDDLELTLGH NTKGRG
101: SAFQSPIPSY QASPSSSSYP SPTRFDPNQS STYLIPYLQN LASSGNLAPL RISNSAPVTP PISSPRRSNP RLPRWQSSNF PVSAPSSPTR RLHHYTSIPE
201: CDESDVSTVD SCRWGNFQSV NVSQTCPPSP TFNLVGKSVS SVGVDVSVKP WEGEKIHDVG IDDLELTLGH NTKGRG
Arabidopsis Description
BEH1BEH1 [Source:UniProtKB/TrEMBL;Acc:A0A178VA20]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.