Factsheet for TraesCS3A01G139000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G156600.1	Wheat	nucleus	99.16	99.72
TraesCS3D01G139300.1	Wheat	nucleus	99.72	99.16
EES00101	Sorghum	nucleus	83.99	85.92
Zm00001d039439_P001	Maize	nucleus	82.87	85.51
Os01t0203000-01	Rice	nucleus	87.08	84.93
GSMUA_Achr10P...	Banana	nucleus	53.09	67.26
HORVU3Hr1G026420.2	Barley	plastid	81.46	66.36
AT1G78700.1	Thale cress	nucleus	59.83	65.54
CDY14593	Canola	nucleus	53.37	64.85
Bra008378.1-P	Field mustard	nucleus	53.09	64.73
KRH21913	Soybean	nucleus	58.71	64.31
CDY26877	Canola	nucleus	52.81	64.16
PGSC0003DMT400018282	Potato	nucleus	56.74	64.13
GSMUA_Achr2P15550_001	Banana	mitochondrion, nucleus	55.06	64.05
Solyc07g062260.2.1	Tomato	nucleus	56.46	63.81
GSMUA_Achr4P31020_001	Banana	nucleus	45.79	62.93
TraesCS7A01G354800.1	Wheat	nucleus	62.92	62.4
GSMUA_Achr8P27730_001	Banana	nucleus	47.75	62.04
KRH27375	Soybean	nucleus	55.9	61.8
CDX88466	Canola	nucleus	52.81	61.24
CDX87440	Canola	nucleus	52.81	61.24
Bra035060.1-P	Field mustard	nucleus	52.25	60.59
KRH21914	Soybean	nucleus	56.18	59.88
GSMUA_Achr9P05670_001	Banana	nucleus	51.12	59.87
KRH27373	Soybean	nucleus	55.9	59.58
CDY66394	Canola	plastid	22.75	58.27
TraesCS6A01G338000.1	Wheat	nucleus	52.53	53.89
TraesCS2A01G187800.1	Wheat	nucleus	41.85	47.6
Bra020986.1-P	Field mustard	cytosol	20.22	47.37
TraesCS3A01G123500.1	Wheat	cytosol, nucleus, plastid	15.17	29.19

Protein Annotations

EnsemblPlants:TraesCS3A01G139000.1	EnsemblPlantsGene:TraesCS3A01G139000	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006351
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719
GO:GO:0009742	GO:GO:0009987	InterPro:BES1_N	InterPro:BZR	PANTHER:PTHR31506	PANTHER:PTHR31506:SF5
PFAM:PF05687	SEG:seg	MapMan:11.3.2.4	MapMan:15.5.39	:	:

Description

No Description!

Coordinates

chr3A:+:116518912..116521151

Molecular Weight (calculated)

37412.8 Da

IEP (calculated)

8.588

GRAVY (calculated)

-0.510

Length

356 amino acids

Sequence
(BLAST)

001: MATGGGGGGG AADFGAAGGA GGRMPTWRER ENNKRRERRR RAIAAKIFSG LRAHGGYKLP KHCDNNEVLK ALCNEAGWVV EPDGTTYRKG CRPAERMDGI
101: GCSVSPSPCS SYQPSPRASY NASPTSSSFP SGASSPFLPH SNNMVNGVDA TPILPWLQTF SNSTASNKRP HLPPLLIHGG SISAPVTPPL SSPTARTPRM
201: KTDWDESVIQ PPWHGSNSPC VVNSTPPSPG RQMVPDPAWL AGIQISSTSP SSPTFSLMSS NPFSVFKEAI PGGGSSRMCT PGQSGTCSPV IPGMARHPDV
301: HMMDVVSDEF AFGSSTNGGA QQATAGLVRA WEGERIHEDS GSDELELTLG SSRTRS

Best Arabidopsis Sequence Match ( AT1G78700.1 )
(BLAST)

001: MTSGTRMPTW RERENNKRRE RRRRAIAAKI FTGLRMYGNY ELPKHCDNNE VLKALCNEAG WIVEPDGTTY RKGCSRPVER MEIGGGSATA SPCSSYQPSP
101: CASYNPSPGS SNFMSPASSS FANLTSGDGQ SLIPWLKHLS TTSSSSASSS SRLPNYLYIP GGSISAPVTP PLSSPTARTP RMNTDWQQLN NSFFVSSTPP
201: SPTRQIIPDS EWFSGIQLAQ SVPASPTFSL VSQNPFGFKE EAASAAGGGG GSRMWTPGQS GTCSPAIPPG ADQTADVPMS EAVAPPEFAF GSNTNGLVKA
301: WEGERIHEES GSDDLELTLG NSSTR

Arabidopsis Description

BEH4BES1/BZR1 homolog protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.