CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039439_P001	Maize	nucleus	94.25	95.07
TraesCS3B01G156600.1	Wheat	nucleus	85.92	84.46
TraesCS3A01G139000.1	Wheat	nucleus	85.92	83.99
TraesCS3D01G139300.1	Wheat	nucleus	86.21	83.8
Os01t0203000-01	Rice	nucleus	86.49	82.47
KRH21913	Soybean	nucleus	60.34	64.62
GSMUA_Achr10P...	Banana	nucleus	52.01	64.41
Bra008378.1-P	Field mustard	nucleus	53.74	64.04
CDY14593	Canola	nucleus	53.74	63.82
AT1G78700.1	Thale cress	nucleus	59.48	63.69
CDY26877	Canola	nucleus	53.45	63.48
EER88499	Sorghum	nucleus, plastid	64.37	62.92
Solyc07g062260.2.1	Tomato	nucleus	56.9	62.86
PGSC0003DMT400018282	Potato	nucleus	56.9	62.86
KRH27375	Soybean	nucleus	57.18	61.8
GSMUA_Achr2P15550_001	Banana	mitochondrion, nucleus	54.02	61.44
GSMUA_Achr4P31020_001	Banana	nucleus	45.11	60.62
CDX87440	Canola	nucleus	53.16	60.26
CDX88466	Canola	nucleus	52.87	59.93
KRH21914	Soybean	nucleus	57.47	59.88
Bra035060.1-P	Field mustard	nucleus	52.59	59.61
KRH27373	Soybean	nucleus	57.18	59.58
GSMUA_Achr8P27730_001	Banana	nucleus	46.84	59.49
GSMUA_Achr9P05670_001	Banana	nucleus	49.71	56.91
HORVU3Hr1G026420.2	Barley	plastid	70.11	55.84
CDY66394	Canola	plastid	21.84	54.68
Bra020986.1-P	Field mustard	cytosol	20.11	46.05
EER99604	Sorghum	nucleus, plastid	43.97	45.54
EER95543	Sorghum	nucleus	39.08	33.01
OQU86218	Sorghum	nucleus	16.38	30.0
KXG29878	Sorghum	nucleus	31.9	29.6
OQU84681	Sorghum	nucleus	33.05	28.82
KXG29877	Sorghum	nucleus	21.55	27.27

Protein Annotations

MapMan:11.3.2.4	MapMan:15.5.39	EntrezGene:8080505	InterPro:BES1_N	InterPro:BZR	UniProt:C5XL78
EnsemblPlants:EES00101	ProteinID:EES00101	ProteinID:EES00101.1	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009742	GO:GO:0009987	PFAM:PF05687	PANTHER:PTHR31506
PANTHER:PTHR31506:SF5	EnsemblPlantsGene:SORBI_3003G026300	unigene:Sbi.8361	UniParc:UPI0001A843B9	RefSeq:XP_002454981.1	SEG:seg

Description

hypothetical protein

Coordinates

chr3:+:2228809..2231971

Molecular Weight (calculated)

36563.0 Da

IEP (calculated)

8.605

GRAVY (calculated)

-0.470

Length

348 amino acids

Sequence
(BLAST)

001: MASGGGGGAG GGLGAAGAGG RMPTWREREN NKRRERRRRA IAAKIFAGLR AHGGYKLPKH CDNNEVLKAL CNEAGWVVEP DGTTYRKGSK PMERMDHIGC
101: SVSPSPCSSY QVSPRASYNA SPTSSSFPSG ASSPFLPPNE MVNGGIDGNP ILPWLKTFSN GTPSKKHPLL PPLLIHGGSI SAPVTPPLSS PSARTPRMKT
201: DWDEATIQPP WHGANSPTIV NSTPPSPGRS IAPDPAWLAG IQISSTSPNS PTFSLVSTNP FSVFKESIPV GNSSSRMCTP GQSGTCSPAI PGMLQHSDVH
301: MMDAVSDEFA FGSSTNGAQQ AAGLVRAWEG ERIHEDSGSD DLELTLKL

Best Arabidopsis Sequence Match ( AT1G78700.1 )
(BLAST)

001: MTSGTRMPTW RERENNKRRE RRRRAIAAKI FTGLRMYGNY ELPKHCDNNE VLKALCNEAG WIVEPDGTTY RKGCSRPVER MEIGGGSATA SPCSSYQPSP
101: CASYNPSPGS SNFMSPASSS FANLTSGDGQ SLIPWLKHLS TTSSSSASSS SRLPNYLYIP GGSISAPVTP PLSSPTARTP RMNTDWQQLN NSFFVSSTPP
201: SPTRQIIPDS EWFSGIQLAQ SVPASPTFSL VSQNPFGFKE EAASAAGGGG GSRMWTPGQS GTCSPAIPPG ADQTADVPMS EAVAPPEFAF GSNTNGLVKA
301: WEGERIHEES GSDDLELTLG NSSTR

Arabidopsis Description

BEH4BES1/BZR1 homolog protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.