CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039635_P001	Maize	nucleus	81.05	90.06
HORVU3Hr1G022940.3	Barley	plastid	59.47	68.07
TraesCS3B01G142600.1	Wheat	nucleus	63.16	65.93
TraesCS3D01G125100.1	Wheat	nucleus	61.05	65.17
TraesCS3A01G123500.1	Wheat	cytosol, nucleus, plastid	62.63	64.32
GSMUA_Achr7P13230_001	Banana	nucleus, plastid	37.37	48.63
Os01t0176900-00	Rice	cytosol	53.68	33.55
PGSC0003DMT400091592	Potato	cytosol, nucleus, plastid	32.11	33.52
Solyc10g076390.1.1	Tomato	cytosol, nucleus, plastid	31.58	33.33
EES00101	Sorghum	nucleus	30.0	16.38
KXG29878	Sorghum	nucleus	28.95	14.67
EER88499	Sorghum	nucleus, plastid	27.37	14.61
EER99604	Sorghum	nucleus, plastid	25.79	14.58
OQU84681	Sorghum	nucleus	30.53	14.54
EER95543	Sorghum	nucleus	28.95	13.35
KXG29877	Sorghum	nucleus	16.32	11.27

Protein Annotations

MapMan:11.3.2.4	MapMan:15.5.39	UniProt:A0A1W0VVQ5	InterPro:BES1_N	InterPro:BZR	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009742
GO:GO:0009987	EnsemblPlants:OQU86218	ProteinID:OQU86218	ProteinID:OQU86218.1	PFAM:PF05687	PANTHER:PTHR31506
PANTHER:PTHR31506:SF3	EnsemblPlantsGene:SORBI_3003G046600	UniParc:UPI0009DC9337	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:4267647..4268762

Molecular Weight (calculated)

20993.4 Da

IEP (calculated)

9.251

GRAVY (calculated)

-1.003

Length

190 amino acids

Sequence
(BLAST)

001: MERQAGAGRE EGEAAAAKAV APVVAQRKGC IRSTQGPWTV RRRGRGGGLT TSLRHPTPRE RENNRQRERR RRQVAARIYA GLRAHAGYAL PKHADQNDVL
101: RALCAEAGYH VDDDGNVTRH QGVDDGAAGP SCSSDHQKSP SVSGTTEAAT QQQQQQLLQQ QEQLLQQQQQ QQQEEEVKMS LELTLSFAYM

Best Arabidopsis Sequence Match ( AT1G19350.3 )
(BLAST)

001: MKRFFYNSSE EERKKKAYSS KKMTSDGATS TSAAAAAAAM ATRRKPSWRE RENNRRRERR RRAVAAKIYT GLRAQGNYNL PKHCDNNEVL KALCSEAGWV
101: VEEDGTTYRK GHKPLPGDMA GSSSRATPYS SHNQSPLSST FDSPILSYQV SPSSSSFPSP SRVGDPHNIS TIFPFLRNGG IPSSLPPLRI SNSAPVTPPV
201: SSPTSRNPKP LPTWESFTKQ SMSMAAKQSM TSLNYPFYAV SAPASPTHHR QFHAPATIPE CDESDSSTVD SGHWISFQKF AQQQPFSASM VPTSPTFNLV
301: KPAPQQLSPN TAAIQEIGQS SEFKFENSQV KPWEGERIHD VAMEDLELTL GNGKAHS

Arabidopsis Description

BES1Brassinosteroid signaling positive regulator (BZR1) family protein [Source:UniProtKB/TrEMBL;Acc:F4HP45]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.