CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046305_P001	Maize	nucleus, plastid	98.03	98.31
GSMUA_Achr10P...	Banana	nucleus	57.02	72.24
GSMUA_Achr8P27730_001	Banana	nucleus	54.49	70.8
Os02t0233200-00	Rice	nucleus	68.26	69.23
Solyc07g062260.2.1	Tomato	nucleus	61.24	69.21
PGSC0003DMT400018282	Potato	nucleus	61.24	69.21
GSMUA_Achr2P15550_001	Banana	mitochondrion, nucleus	58.99	68.63
GSMUA_Achr4P31020_001	Banana	nucleus	49.72	68.34
GSMUA_Achr9P05670_001	Banana	nucleus	57.58	67.43
KRH21913	Soybean	nucleus	60.67	66.46
AT1G78700.1	Thale cress	nucleus	59.83	65.54
TraesCS6B01G368700.1	Wheat	nucleus	65.17	65.17
TraesCS6A01G338000.1	Wheat	nucleus	63.48	65.13
KRH27375	Soybean	nucleus	58.43	64.6
CDY14593	Canola	nucleus	53.09	64.51
Bra008378.1-P	Field mustard	nucleus	52.81	64.38
TraesCS6D01G318800.1	Wheat	nucleus	62.92	64.37
EES00101	Sorghum	nucleus	62.92	64.37
KRH27373	Soybean	nucleus	60.11	64.07
CDY26877	Canola	nucleus	52.53	63.82
KRH21914	Soybean	nucleus	59.55	63.47
CDX87440	Canola	nucleus	54.49	63.19
CDX88466	Canola	nucleus	54.21	62.87
Bra035060.1-P	Field mustard	nucleus	53.93	62.54
HORVU6Hr1G081650.1	Barley	cytosol, nucleus, plastid	65.17	60.89
CDY66394	Canola	plastid	20.79	53.24
Bra020986.1-P	Field mustard	cytosol	20.22	47.37
EER99604	Sorghum	nucleus, plastid	42.13	44.64
EER95543	Sorghum	nucleus	40.73	35.19
KXG29878	Sorghum	nucleus	32.02	30.4
OQU84681	Sorghum	nucleus	33.43	29.82
KXG29877	Sorghum	nucleus	21.63	28.0
OQU86218	Sorghum	nucleus	14.61	27.37

Protein Annotations

MapMan:11.3.2.4	MapMan:15.5.39	EntrezGene:8073072	InterPro:BES1_N	InterPro:BZR	UniProt:C5Z4I1
EnsemblPlants:EER88499	ProteinID:EER88499	ProteinID:EER88499.1	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009742	GO:GO:0009987	PFAM:PF05687	PANTHER:PTHR31506
PANTHER:PTHR31506:SF2	EnsemblPlantsGene:SORBI_3010G163900	unigene:Sbi.8127	UniParc:UPI0001A891B6	RefSeq:XP_002437132.1	SEG:seg

Description

hypothetical protein

Coordinates

chr10:+:48237055..48240678

Molecular Weight (calculated)

37661.5 Da

IEP (calculated)

8.080

GRAVY (calculated)

-0.610

Length

356 amino acids

Sequence
(BLAST)

001: MTSGAGGAAA GIGGTRVPTW RERENNRRRE RRRRAIAAKI FAGLRAYGNY NLPKHCDNNE VLKALCNEAG WTVEPDGTTY RKGCKPLATE RPDPIGRSAS
101: PSPCSSYQPS PRASYNPSPA SSSFPSSGSS SHITLGGNNF MGGVEGNSLI PWLKNLSSSS SFASSSKFPQ LHHLYFNGGS ISAPVTPPSS SPTRTPRIKT
201: DWENPSVQPP WAGANYASLP NSQPPSPGHH QVAPDPAWLA GFQISSAGPS SPTYSLVAPN PFGIFKETIA STSRMCTPGQ SGTCSPVMGG VPIHHDVQMV
301: DGAPDDFAFG SSSNGNNESP GLVKAWEGER IHEECASDEH ELELTLGSSK TRADPS

Best Arabidopsis Sequence Match ( AT1G78700.1 )
(BLAST)

001: MTSGTRMPTW RERENNKRRE RRRRAIAAKI FTGLRMYGNY ELPKHCDNNE VLKALCNEAG WIVEPDGTTY RKGCSRPVER MEIGGGSATA SPCSSYQPSP
101: CASYNPSPGS SNFMSPASSS FANLTSGDGQ SLIPWLKHLS TTSSSSASSS SRLPNYLYIP GGSISAPVTP PLSSPTARTP RMNTDWQQLN NSFFVSSTPP
201: SPTRQIIPDS EWFSGIQLAQ SVPASPTFSL VSQNPFGFKE EAASAAGGGG GSRMWTPGQS GTCSPAIPPG ADQTADVPMS EAVAPPEFAF GSNTNGLVKA
301: WEGERIHEES GSDDLELTLG NSSTR

Arabidopsis Description

BEH4BES1/BZR1 homolog protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.